RNA–Protein interactions for RNA: ENST00000372079.1

PRDX1-203, Transcript of peroxiredoxin 1, humanhuman

TSL 3 BASIC

Gene PRDX1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDX1-203ENST00000372079 NISCHQ9Y2I1 1504 aa29.46■■■□□ 2.31
PRDX1-203ENST00000372079 AEBP2Q6ZN18 517 aaPredicted RBP27.15■■□□□ 1.94
PRDX1-203ENST00000372079 CCDC180Q9P1Z9 1646 aa26.59■■□□□ 1.85
PRDX1-203ENST00000372079 ABCC9O60706 1549 aa26.59■■□□□ 1.85
PRDX1-203ENST00000372079 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
PRDX1-203ENST00000372079 RB1CC1Q8TDY2 1594 aa25.34■■□□□ 1.65
PRDX1-203ENST00000372079 NACADO15069 1562 aa25.14■■□□□ 1.62
PRDX1-203ENST00000372079 DNAJC5BQ9UF47 199 aa25.05■■□□□ 1.6
PRDX1-203ENST00000372079 DCAF8L2P0C7V8 631 aa24.82■■□□□ 1.56
PRDX1-203ENST00000372079 UNC13AQ9UPW8 1703 aa24.81■■□□□ 1.56
PRDX1-203ENST00000372079 MYO15BQ96JP2 1530 aa24.78■■□□□ 1.56
PRDX1-203ENST00000372079 PABPN1Q86U42 306 aaKnown RBP eCLIP24.7■■□□□ 1.54
PRDX1-203ENST00000372079 BICRAQ9NZM4 1560 aa24.58■■□□□ 1.52
PRDX1-203ENST00000372079 DCAF1Q9Y4B6 1507 aa24.39■■□□□ 1.49
PRDX1-203ENST00000372079 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
PRDX1-203ENST00000372079 SHROOM4Q9ULL8 1493 aa24.32■■□□□ 1.48
PRDX1-203ENST00000372079 SCRIBQ14160 1630 aa24.11■■□□□ 1.45
PRDX1-203ENST00000372079 CC2D2AQ9P2K1 1620 aa24.07■■□□□ 1.44
PRDX1-203ENST00000372079 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
PRDX1-203ENST00000372079 EIF4G1Q04637 1599 aaKnown RBP23.99■■□□□ 1.43
PRDX1-203ENST00000372079 SENP3Q9H4L4 574 aaPredicted RBP23.23■■□□□ 1.31
PRDX1-203ENST00000372079 DNAJC5Q9H3Z4 198 aa23.18■■□□□ 1.3
PRDX1-203ENST00000372079 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
PRDX1-203ENST00000372079 CUX2O14529 1486 aa23.07■■□□□ 1.28
PRDX1-203ENST00000372079 ATAD2BQ9ULI0 1458 aa23.06■■□□□ 1.28
PRDX1-203ENST00000372079 SMARCA2P51531 1590 aa23.04■■□□□ 1.28
PRDX1-203ENST00000372079 SMARCA4P51532 1647 aa23.03■■□□□ 1.28
PRDX1-203ENST00000372079 HMGXB3Q12766 1538 aa23.02■■□□□ 1.28
PRDX1-203ENST00000372079 ERCC6Q03468 1493 aa23■■□□□ 1.27
PRDX1-203ENST00000372079 BAZ1AQ9NRL2 1556 aaPredicted RBP22.9■■□□□ 1.26
PRDX1-203ENST00000372079 PHF23Q9BUL5 403 aaPredicted RBP22.87■■□□□ 1.25
PRDX1-203ENST00000372079 PEG3Q9GZU2 1588 aa22.84■■□□□ 1.25
PRDX1-203ENST00000372079 BAZ1BQ9UIG0 1483 aaKnown RBP22.83■■□□□ 1.25
PRDX1-203ENST00000372079 NESP48681 1621 aa22.79■■□□□ 1.24
PRDX1-203ENST00000372079 LAMC3Q9Y6N6 1575 aa22.71■■□□□ 1.23
PRDX1-203ENST00000372079 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
PRDX1-203ENST00000372079 THOC2Q8NI27 1593 aaKnown RBP22.66■■□□□ 1.22
PRDX1-203ENST00000372079 KIF21AQ7Z4S6 1674 aa22.58■■□□□ 1.2
PRDX1-203ENST00000372079 PDS5BQ9NTI5 1447 aa22.57■■□□□ 1.2
PRDX1-203ENST00000372079 CADPSQ9ULU8 1353 aa22.45■■□□□ 1.18
PRDX1-203ENST00000372079 WIZO95785 1651 aa22.4■■□□□ 1.18
PRDX1-203ENST00000372079 MRC2Q9UBG0 1479 aa22.35■■□□□ 1.17
PRDX1-203ENST00000372079 WDR62O43379 1518 aa22.32■■□□□ 1.16
PRDX1-203ENST00000372079 CEP164Q9UPV0 1460 aa22.23■■□□□ 1.15
PRDX1-203ENST00000372079 FANCD2Q9BXW9 1451 aa22.18■■□□□ 1.14
PRDX1-203ENST00000372079 CFTRP13569 1480 aa22.17■■□□□ 1.14
PRDX1-203ENST00000372079 RSF1Q96T23 1441 aaPredicted RBP22.16■■□□□ 1.14
PRDX1-203ENST00000372079 TOP2AP11388 1531 aaKnown RBP22.13■■□□□ 1.13
PRDX1-203ENST00000372079 PRDM2Q13029 1718 aa22.06■■□□□ 1.12
PRDX1-203ENST00000372079 TRIM41Q8WV44 630 aa22.02■■□□□ 1.12
PRDX1-203ENST00000372079 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
PRDX1-203ENST00000372079 OSCARQ8IYS5 282 aa21.95■■□□□ 1.1
PRDX1-203ENST00000372079 CCDC88BA6NC98 1476 aa21.85■■□□□ 1.09
PRDX1-203ENST00000372079 IFT140Q96RY7 1462 aa21.82■■□□□ 1.08
PRDX1-203ENST00000372079 ABCC8Q09428 1581 aa21.77■■□□□ 1.08
PRDX1-203ENST00000372079 TOPBP1Q92547 1522 aa21.75■■□□□ 1.07
PRDX1-203ENST00000372079 ZNF608Q9ULD9 1512 aaPredicted RBP21.74■■□□□ 1.07
PRDX1-203ENST00000372079 RIMBP3CA6NJZ7 1639 aa21.69■■□□□ 1.06
PRDX1-203ENST00000372079 RIMBP3BA6NNM3 1639 aa21.69■■□□□ 1.06
PRDX1-203ENST00000372079 RIMBP3Q9UFD9 1639 aa21.69■■□□□ 1.06
PRDX1-203ENST00000372079 DNMBPQ6XZF7 1577 aa21.69■■□□□ 1.06
PRDX1-203ENST00000372079 FOXD1Q16676 465 aa21.66■■□□□ 1.06
PRDX1-203ENST00000372079 EIF4G3O43432 1585 aaKnown RBP21.65■■□□□ 1.06
PRDX1-203ENST00000372079 TARBP1Q13395 1621 aaKnown RBP21.6■■□□□ 1.05
PRDX1-203ENST00000372079 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
PRDX1-203ENST00000372079 CHD1O14646 1710 aa21.56■■□□□ 1.04
PRDX1-203ENST00000372079 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.038e-7■■■■□ 23.2
PRDX1-203ENST00000372079 POLA1P09884 1462 aaPredicted RBP21.52■■□□□ 1.03
PRDX1-203ENST00000372079 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
PRDX1-203ENST00000372079 SOGA1O94964 1423 aa21.41■■□□□ 1.02
PRDX1-203ENST00000372079 RAD54L2Q9Y4B4 1467 aa21.4■■□□□ 1.02
PRDX1-203ENST00000372079 SUPT5HO00267 1087 aaKnown RBP21.4■■□□□ 1.02
PRDX1-203ENST00000372079 CYB5RLQ6IPT4 315 aa21.4■■□□□ 1.02
PRDX1-203ENST00000372079 FBLN2P98095 1184 aa21.38■■□□□ 1.01
PRDX1-203ENST00000372079 ARAP1Q96P48 1450 aa21.36■■□□□ 1.01
PRDX1-203ENST00000372079 FGD5Q6ZNL6 1462 aa21.35■■□□□ 1.01
PRDX1-203ENST00000372079 TDRD9Q8NDG6 1382 aaKnown RBP21.35■■□□□ 1.01
PRDX1-203ENST00000372079 CUX1P39880 1505 aa21.32■■□□□ 1
PRDX1-203ENST00000372079 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
PRDX1-203ENST00000372079 MAGI1Q96QZ7 1491 aaPredicted RBP21.31■■□□□ 1
PRDX1-203ENST00000372079 CLASP1Q7Z460 1538 aa21.28■■□□□ 1
PRDX1-203ENST00000372079 SYNJ1O43426 1573 aa21.27■■□□□ 1
PRDX1-203ENST00000372079 GRIN2BQ13224 1484 aa21.27■■□□□ 1
PRDX1-203ENST00000372079 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
PRDX1-203ENST00000372079 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
PRDX1-203ENST00000372079 SYNJ2O15056 1496 aa21.21■□□□□ 0.99
PRDX1-203ENST00000372079 TRHP20396 242 aaPredicted RBP21.2■□□□□ 0.98
PRDX1-203ENST00000372079 GAPVD1Q14C86 1478 aa21.16■□□□□ 0.98
PRDX1-203ENST00000372079 ABCA10Q8WWZ4 1543 aa21.14■□□□□ 0.97
PRDX1-203ENST00000372079 ABCA5Q8WWZ7 1642 aa21.13■□□□□ 0.97
PRDX1-203ENST00000372079 WRNQ14191 1432 aaPredicted RBP eCLIP21.01■□□□□ 0.95
PRDX1-203ENST00000372079 BIVM-ERCC5R4GMW8 1640 aa20.99■□□□□ 0.95
PRDX1-203ENST00000372079 GRIN2AQ12879 1464 aa20.98■□□□□ 0.95
PRDX1-203ENST00000372079 TOP2BQ02880 1626 aa20.97■□□□□ 0.95
PRDX1-203ENST00000372079 ADAMTS12P58397 1594 aa20.97■□□□□ 0.95
PRDX1-203ENST00000372079 NUP160Q12769 1436 aa20.93■□□□□ 0.94
PRDX1-203ENST00000372079 CEP170Q5SW79 1584 aa20.91■□□□□ 0.94
PRDX1-203ENST00000372079 FHAD1B1AJZ9 1412 aa20.9■□□□□ 0.94
PRDX1-203ENST00000372079 SHROOM2Q13796 1616 aa20.89■□□□□ 0.93
PRDX1-203ENST00000372079 ERICH3Q5RHP9 1530 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms