RNA–Protein interactions for RNA: ENST00000592804.1

PTBP1-218, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-218ENST00000592804 NISCHQ9Y2I1 1504 aa47.41■■■■■ 5.18
PTBP1-218ENST00000592804 CCDC180Q9P1Z9 1646 aa42.24■■■■■ 4.35
PTBP1-218ENST00000592804 ABCC9O60706 1549 aa41.17■■■■■ 4.18
PTBP1-218ENST00000592804 RB1CC1Q8TDY2 1594 aa39.66■■■■□ 3.94
PTBP1-218ENST00000592804 NACADO15069 1562 aa39.6■■■■□ 3.93
PTBP1-218ENST00000592804 ZCCHC6Q5VYS8 1495 aaKnown RBP39.52■■■■□ 3.92
PTBP1-218ENST00000592804 DCAF8L2P0C7V8 631 aa39.49■■■■□ 3.91
PTBP1-218ENST00000592804 MYO15BQ96JP2 1530 aa39.34■■■■□ 3.89
PTBP1-218ENST00000592804 DCAF1Q9Y4B6 1507 aa39.21■■■■□ 3.87
PTBP1-218ENST00000592804 UNC13AQ9UPW8 1703 aa39.01■■■■□ 3.84
PTBP1-218ENST00000592804 SCRIBQ14160 1630 aa38.53■■■■□ 3.76
PTBP1-218ENST00000592804 BICRAQ9NZM4 1560 aa38.5■■■■□ 3.75
PTBP1-218ENST00000592804 PABPN1Q86U42 306 aaKnown RBP eCLIP38.42■■■■□ 3.74
PTBP1-218ENST00000592804 SHROOM4Q9ULL8 1493 aa37.98■■■■□ 3.67
PTBP1-218ENST00000592804 DNAJC5BQ9UF47 199 aa37.69■■■■□ 3.62
PTBP1-218ENST00000592804 EIF4G1Q04637 1599 aaKnown RBP37.45■■■■□ 3.59
PTBP1-218ENST00000592804 CC2D2AQ9P2K1 1620 aa37.32■■■■□ 3.56
PTBP1-218ENST00000592804 CECR2Q9BXF3 1484 aa36.96■■■■□ 3.51
PTBP1-218ENST00000592804 SMARCA4P51532 1647 aa36.85■■■■□ 3.49
PTBP1-218ENST00000592804 BAZ1AQ9NRL2 1556 aaPredicted RBP36.75■■■■□ 3.47
PTBP1-218ENST00000592804 MROH2BQ7Z745 1585 aa36.57■■■■□ 3.44
PTBP1-218ENST00000592804 ATAD2BQ9ULI0 1458 aa36.55■■■■□ 3.44
PTBP1-218ENST00000592804 SMARCA2P51531 1590 aa36.52■■■■□ 3.44
PTBP1-218ENST00000592804 NCAPD3P42695 1498 aa36.48■■■■□ 3.43
PTBP1-218ENST00000592804 PEG3Q9GZU2 1588 aa36.44■■■■□ 3.42
PTBP1-218ENST00000592804 HMGXB3Q12766 1538 aa36.38■■■■□ 3.41
PTBP1-218ENST00000592804 WIZO95785 1651 aa36.27■■■■□ 3.4
PTBP1-218ENST00000592804 BAZ1BQ9UIG0 1483 aaKnown RBP36.25■■■■□ 3.39
PTBP1-218ENST00000592804 RSF1Q96T23 1441 aaPredicted RBP36.1■■■■□ 3.37
PTBP1-218ENST00000592804 TOP2AP11388 1531 aaKnown RBP35.8■■■■□ 3.32
PTBP1-218ENST00000592804 NESP48681 1621 aa35.68■■■■□ 3.3
PTBP1-218ENST00000592804 LAMC3Q9Y6N6 1575 aa35.59■■■■□ 3.29
PTBP1-218ENST00000592804 ERCC6Q03468 1493 aa35.44■■■■□ 3.26
PTBP1-218ENST00000592804 CADPSQ9ULU8 1353 aa35.4■■■■□ 3.26
PTBP1-218ENST00000592804 KIF21AQ7Z4S6 1674 aa35.4■■■■□ 3.26
PTBP1-218ENST00000592804 CCDC88BA6NC98 1476 aa35.35■■■■□ 3.25
PTBP1-218ENST00000592804 PRDM2Q13029 1718 aa35.26■■■■□ 3.24
PTBP1-218ENST00000592804 PDS5BQ9NTI5 1447 aa35.25■■■■□ 3.23
PTBP1-218ENST00000592804 CFTRP13569 1480 aa35.23■■■■□ 3.23
PTBP1-218ENST00000592804 SUPT5HO00267 1087 aaKnown RBP35.2■■■■□ 3.23
PTBP1-218ENST00000592804 THOC2Q8NI27 1593 aaKnown RBP35.19■■■■□ 3.22
PTBP1-218ENST00000592804 CUX2O14529 1486 aa35.05■■■■□ 3.2
PTBP1-218ENST00000592804 FANCD2Q9BXW9 1451 aa35.05■■■■□ 3.2
PTBP1-218ENST00000592804 CEP164Q9UPV0 1460 aa35.01■■■■□ 3.19
PTBP1-218ENST00000592804 MRC2Q9UBG0 1479 aa34.95■■■■□ 3.19
PTBP1-218ENST00000592804 WDR62O43379 1518 aa34.86■■■■□ 3.17
PTBP1-218ENST00000592804 URB2Q14146 1524 aaKnown RBP34.74■■■■□ 3.15
PTBP1-218ENST00000592804 TOPBP1Q92547 1522 aa34.52■■■■□ 3.12
PTBP1-218ENST00000592804 DNMBPQ6XZF7 1577 aa34.52■■■■□ 3.12
PTBP1-218ENST00000592804 DNAJC5Q9H3Z4 198 aa34.49■■■■□ 3.11
PTBP1-218ENST00000592804 ABCC8Q09428 1581 aa34.46■■■■□ 3.11
PTBP1-218ENST00000592804 CUX1P39880 1505 aa34.31■■■■□ 3.08
PTBP1-218ENST00000592804 IFT140Q96RY7 1462 aa34.25■■■■□ 3.07
PTBP1-218ENST00000592804 POLA1P09884 1462 aaPredicted RBP34.22■■■■□ 3.07
PTBP1-218ENST00000592804 TARBP1Q13395 1621 aaKnown RBP34.21■■■■□ 3.07
PTBP1-218ENST00000592804 FGD5Q6ZNL6 1462 aa34.16■■■■□ 3.06
PTBP1-218ENST00000592804 ZNF608Q9ULD9 1512 aaPredicted RBP34.14■■■■□ 3.06
PTBP1-218ENST00000592804 BIVM-ERCC5R4GMW8 1640 aa34.1■■■■□ 3.05
PTBP1-218ENST00000592804 RAD54L2Q9Y4B4 1467 aa34.08■■■■□ 3.05
PTBP1-218ENST00000592804 EIF4G3O43432 1585 aaKnown RBP34.07■■■■□ 3.05
PTBP1-218ENST00000592804 SYNJ1O43426 1573 aa34.06■■■■□ 3.04
PTBP1-218ENST00000592804 TOP2BQ02880 1626 aa34.05■■■■□ 3.04
PTBP1-218ENST00000592804 SOGA1O94964 1423 aa34.04■■■■□ 3.04
PTBP1-218ENST00000592804 WRNQ14191 1432 aaPredicted RBP eCLIP34.04■■■■□ 3.04
PTBP1-218ENST00000592804 WDR97A6NE52 1622 aa34.02■■■■□ 3.04
PTBP1-218ENST00000592804 AQRO60306 1485 aaKnown RBP eCLIP33.92■■■■□ 3.023e-19■■■■□ 24.1
PTBP1-218ENST00000592804 TDRD9Q8NDG6 1382 aaKnown RBP33.84■■■■□ 3.01
PTBP1-218ENST00000592804 ABCA10Q8WWZ4 1543 aa33.81■■■■□ 3
PTBP1-218ENST00000592804 PBRM1Q86U86 1689 aa33.8■■■■□ 3
PTBP1-218ENST00000592804 ABCA5Q8WWZ7 1642 aa33.76■■■■□ 3
PTBP1-218ENST00000592804 CHD1O14646 1710 aa33.74■■■□□ 2.99
PTBP1-218ENST00000592804 GAPVD1Q14C86 1478 aa33.67■■■□□ 2.98
PTBP1-218ENST00000592804 GRIN2BQ13224 1484 aa33.64■■■□□ 2.98
PTBP1-218ENST00000592804 SNAPC4Q5SXM2 1469 aa33.63■■■□□ 2.97
PTBP1-218ENST00000592804 MAGI1Q96QZ7 1491 aaPredicted RBP33.56■■■□□ 2.96
PTBP1-218ENST00000592804 OSCARQ8IYS5 282 aa33.54■■■□□ 2.96
PTBP1-218ENST00000592804 FBLN2P98095 1184 aa33.44■■■□□ 2.94
PTBP1-218ENST00000592804 SYNJ2O15056 1496 aa33.43■■■□□ 2.94
PTBP1-218ENST00000592804 ADAMTS12P58397 1594 aa33.43■■■□□ 2.94
PTBP1-218ENST00000592804 ERICH3Q5RHP9 1530 aa33.42■■■□□ 2.94
PTBP1-218ENST00000592804 CHMP7Q8WUX9 453 aaPredicted RBP33.34■■■□□ 2.93
PTBP1-218ENST00000592804 KIF27Q86VH2 1401 aa33.3■■■□□ 2.92
PTBP1-218ENST00000592804 FHAD1B1AJZ9 1412 aa33.26■■■□□ 2.91
PTBP1-218ENST00000592804 GRIN2AQ12879 1464 aa33.24■■■□□ 2.91
PTBP1-218ENST00000592804 CLASP1Q7Z460 1538 aa33.23■■■□□ 2.91
PTBP1-218ENST00000592804 TRIM41Q8WV44 630 aa33.21■■■□□ 2.91
PTBP1-218ENST00000592804 CUL7Q14999 1698 aa33.2■■■□□ 2.91
PTBP1-218ENST00000592804 RIMBP3CA6NJZ7 1639 aa33.19■■■□□ 2.9
PTBP1-218ENST00000592804 RIMBP3BA6NNM3 1639 aa33.19■■■□□ 2.9
PTBP1-218ENST00000592804 RIMBP3Q9UFD9 1639 aa33.19■■■□□ 2.9
PTBP1-218ENST00000592804 IGF1RP08069 1367 aa33.15■■■□□ 2.9
PTBP1-218ENST00000592804 CEP170Q5SW79 1584 aa33.14■■■□□ 2.9
PTBP1-218ENST00000592804 ARHGEF11O15085 1522 aa33.11■■■□□ 2.89
PTBP1-218ENST00000592804 RUSC2Q8N2Y8 1516 aa33.11■■■□□ 2.89
PTBP1-218ENST00000592804 NUP160Q12769 1436 aa33.07■■■□□ 2.88
PTBP1-218ENST00000592804 CARMIL1Q5VZK9 1371 aa32.96■■■□□ 2.87
PTBP1-218ENST00000592804 SHROOM2Q13796 1616 aa32.92■■■□□ 2.86
PTBP1-218ENST00000592804 CHIC1Q5VXU3 224 aa32.88■■■□□ 2.85
PTBP1-218ENST00000592804 ARAP1Q96P48 1450 aa32.85■■■□□ 2.85
PTBP1-218ENST00000592804 ERCC6L2Q5T890 1561 aa32.82■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms