RNA–Protein interactions for RNA: ENST00000399312.2

MRPS6-201, Transcript of mitochondrial ribosomal protein S6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS6, Length 990 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS6-201ENST00000399312 NISCHQ9Y2I1 1504 aa38.65■■■■□ 3.78
MRPS6-201ENST00000399312 CCDC180Q9P1Z9 1646 aa34.7■■■■□ 3.14
MRPS6-201ENST00000399312 ABCC9O60706 1549 aa34.27■■■■□ 3.08
MRPS6-201ENST00000399312 RB1CC1Q8TDY2 1594 aa32.92■■■□□ 2.86
MRPS6-201ENST00000399312 NACADO15069 1562 aa32.75■■■□□ 2.83
MRPS6-201ENST00000399312 DCAF8L2P0C7V8 631 aa32.55■■■□□ 2.8
MRPS6-201ENST00000399312 MYO15BQ96JP2 1530 aa32.4■■■□□ 2.78
MRPS6-201ENST00000399312 ZCCHC6Q5VYS8 1495 aaKnown RBP32.09■■■□□ 2.73
MRPS6-201ENST00000399312 DCAF1Q9Y4B6 1507 aa32.05■■■□□ 2.72
MRPS6-201ENST00000399312 UNC13AQ9UPW8 1703 aa31.98■■■□□ 2.71
MRPS6-201ENST00000399312 PABPN1Q86U42 306 aaKnown RBP eCLIP31.89■■■□□ 2.7
MRPS6-201ENST00000399312 DNAJC5BQ9UF47 199 aa31.71■■■□□ 2.67
MRPS6-201ENST00000399312 BICRAQ9NZM4 1560 aa31.7■■■□□ 2.67
MRPS6-201ENST00000399312 SHROOM4Q9ULL8 1493 aa31.65■■■□□ 2.66
MRPS6-201ENST00000399312 SCRIBQ14160 1630 aa31.49■■■□□ 2.63
MRPS6-201ENST00000399312 EIF4G1Q04637 1599 aaKnown RBP31.02■■■□□ 2.56
MRPS6-201ENST00000399312 CC2D2AQ9P2K1 1620 aa31.01■■■□□ 2.55
MRPS6-201ENST00000399312 CECR2Q9BXF3 1484 aa30.91■■■□□ 2.54
MRPS6-201ENST00000399312 NCAPD3P42695 1498 aa30.15■■■□□ 2.42
MRPS6-201ENST00000399312 SMARCA2P51531 1590 aa30.12■■■□□ 2.41
MRPS6-201ENST00000399312 SMARCA4P51532 1647 aa30.11■■■□□ 2.41
MRPS6-201ENST00000399312 BAZ1AQ9NRL2 1556 aaPredicted RBP30.09■■■□□ 2.41
MRPS6-201ENST00000399312 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
MRPS6-201ENST00000399312 HMGXB3Q12766 1538 aa30.01■■■□□ 2.39
MRPS6-201ENST00000399312 BAZ1BQ9UIG0 1483 aaKnown RBP29.87■■■□□ 2.37
MRPS6-201ENST00000399312 PEG3Q9GZU2 1588 aa29.85■■■□□ 2.37
MRPS6-201ENST00000399312 ERCC6Q03468 1493 aa29.74■■■□□ 2.35
MRPS6-201ENST00000399312 MROH2BQ7Z745 1585 aa29.69■■■□□ 2.34
MRPS6-201ENST00000399312 CUX2O14529 1486 aa29.6■■■□□ 2.33
MRPS6-201ENST00000399312 LAMC3Q9Y6N6 1575 aa29.51■■■□□ 2.31
MRPS6-201ENST00000399312 NESP48681 1621 aa29.43■■■□□ 2.3
MRPS6-201ENST00000399312 WIZO95785 1651 aa29.37■■■□□ 2.29
MRPS6-201ENST00000399312 PDS5BQ9NTI5 1447 aa29.37■■■□□ 2.29
MRPS6-201ENST00000399312 CADPSQ9ULU8 1353 aa29.26■■■□□ 2.27
MRPS6-201ENST00000399312 RSF1Q96T23 1441 aaPredicted RBP29.21■■■□□ 2.27
MRPS6-201ENST00000399312 THOC2Q8NI27 1593 aaKnown RBP29.18■■■□□ 2.26
MRPS6-201ENST00000399312 KIF21AQ7Z4S6 1674 aa29.15■■■□□ 2.26
MRPS6-201ENST00000399312 DNAJC5Q9H3Z4 198 aa29.15■■■□□ 2.26
MRPS6-201ENST00000399312 TOP2AP11388 1531 aaKnown RBP29.13■■■□□ 2.25
MRPS6-201ENST00000399312 MRC2Q9UBG0 1479 aa29.01■■■□□ 2.23
MRPS6-201ENST00000399312 CEP164Q9UPV0 1460 aa28.98■■■□□ 2.23
MRPS6-201ENST00000399312 CFTRP13569 1480 aa28.95■■■□□ 2.22
MRPS6-201ENST00000399312 FANCD2Q9BXW9 1451 aa28.91■■■□□ 2.22
MRPS6-201ENST00000399312 WDR62O43379 1518 aa28.9■■■□□ 2.22
MRPS6-201ENST00000399312 PRDM2Q13029 1718 aa28.78■■■□□ 2.2
MRPS6-201ENST00000399312 CCDC88BA6NC98 1476 aa28.72■■■□□ 2.19
MRPS6-201ENST00000399312 URB2Q14146 1524 aaKnown RBP28.57■■■□□ 2.16
MRPS6-201ENST00000399312 ABCC8Q09428 1581 aa28.53■■■□□ 2.16
MRPS6-201ENST00000399312 IFT140Q96RY7 1462 aa28.4■■■□□ 2.14
MRPS6-201ENST00000399312 TOPBP1Q92547 1522 aa28.37■■■□□ 2.13
MRPS6-201ENST00000399312 DNMBPQ6XZF7 1577 aa28.34■■■□□ 2.13
MRPS6-201ENST00000399312 OSCARQ8IYS5 282 aa28.28■■■□□ 2.12
MRPS6-201ENST00000399312 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
MRPS6-201ENST00000399312 ZNF608Q9ULD9 1512 aaPredicted RBP28.13■■■□□ 2.09
MRPS6-201ENST00000399312 EIF4G3O43432 1585 aaKnown RBP28.1■■■□□ 2.09
MRPS6-201ENST00000399312 POLA1P09884 1462 aaPredicted RBP28.08■■■□□ 2.09
MRPS6-201ENST00000399312 TARBP1Q13395 1621 aaKnown RBP28.06■■■□□ 2.08
MRPS6-201ENST00000399312 WDR97A6NE52 1622 aa28.03■■■□□ 2.08
MRPS6-201ENST00000399312 SOGA1O94964 1423 aa28.01■■■□□ 2.08
MRPS6-201ENST00000399312 TRIM41Q8WV44 630 aa28■■■□□ 2.07
MRPS6-201ENST00000399312 AQRO60306 1485 aaKnown RBP eCLIP27.95■■■□□ 2.07
MRPS6-201ENST00000399312 FGD5Q6ZNL6 1462 aa27.95■■■□□ 2.07
MRPS6-201ENST00000399312 CUX1P39880 1505 aa27.91■■■□□ 2.06
MRPS6-201ENST00000399312 RAD54L2Q9Y4B4 1467 aa27.9■■■□□ 2.06
MRPS6-201ENST00000399312 FBLN2P98095 1184 aa27.84■■■□□ 2.05
MRPS6-201ENST00000399312 TDRD9Q8NDG6 1382 aaKnown RBP27.84■■■□□ 2.05
MRPS6-201ENST00000399312 CHD1O14646 1710 aa27.83■■■□□ 2.05
MRPS6-201ENST00000399312 GRIN2BQ13224 1484 aa27.78■■■□□ 2.04
MRPS6-201ENST00000399312 MAGI1Q96QZ7 1491 aaPredicted RBP27.78■■■□□ 2.04
MRPS6-201ENST00000399312 RIMBP3CA6NJZ7 1639 aa27.76■■■□□ 2.03
MRPS6-201ENST00000399312 RIMBP3BA6NNM3 1639 aa27.76■■■□□ 2.03
MRPS6-201ENST00000399312 RIMBP3Q9UFD9 1639 aa27.76■■■□□ 2.03
MRPS6-201ENST00000399312 SNAPC4Q5SXM2 1469 aa27.74■■■□□ 2.03
MRPS6-201ENST00000399312 ARHGEF11O15085 1522 aa27.72■■■□□ 2.03
MRPS6-201ENST00000399312 CHMP7Q8WUX9 453 aaPredicted RBP27.72■■■□□ 2.03
MRPS6-201ENST00000399312 WRNQ14191 1432 aaPredicted RBP eCLIP27.7■■■□□ 2.03
MRPS6-201ENST00000399312 ABCA10Q8WWZ4 1543 aa27.7■■■□□ 2.02
MRPS6-201ENST00000399312 GAPVD1Q14C86 1478 aa27.69■■■□□ 2.02
MRPS6-201ENST00000399312 SYNJ1O43426 1573 aa27.66■■■□□ 2.02
MRPS6-201ENST00000399312 SYNJ2O15056 1496 aa27.65■■■□□ 2.02
MRPS6-201ENST00000399312 PBRM1Q86U86 1689 aa27.65■■■□□ 2.02
MRPS6-201ENST00000399312 TOP2BQ02880 1626 aa27.63■■■□□ 2.01
MRPS6-201ENST00000399312 BIVM-ERCC5R4GMW8 1640 aa27.63■■■□□ 2.01
MRPS6-201ENST00000399312 ABCA5Q8WWZ7 1642 aa27.59■■■□□ 2.01
MRPS6-201ENST00000399312 CLASP1Q7Z460 1538 aa27.51■■□□□ 1.99
MRPS6-201ENST00000399312 CYB5RLQ6IPT4 315 aa27.5■■□□□ 1.99
MRPS6-201ENST00000399312 ARAP1Q96P48 1450 aa27.41■■□□□ 1.98
MRPS6-201ENST00000399312 ERICH3Q5RHP9 1530 aa27.41■■□□□ 1.98
MRPS6-201ENST00000399312 ADAMTS12P58397 1594 aa27.39■■□□□ 1.97
MRPS6-201ENST00000399312 GRIN2AQ12879 1464 aa27.38■■□□□ 1.97
MRPS6-201ENST00000399312 FHAD1B1AJZ9 1412 aa27.38■■□□□ 1.97
MRPS6-201ENST00000399312 NUP160Q12769 1436 aa27.25■■□□□ 1.95
MRPS6-201ENST00000399312 TRHP20396 242 aaPredicted RBP27.21■■□□□ 1.95
MRPS6-201ENST00000399312 CEP170Q5SW79 1584 aa27.18■■□□□ 1.94
MRPS6-201ENST00000399312 KIF27Q86VH2 1401 aa27.18■■□□□ 1.94
MRPS6-201ENST00000399312 SHROOM2Q13796 1616 aa27.1■■□□□ 1.93
MRPS6-201ENST00000399312 CUL7Q14999 1698 aa27.1■■□□□ 1.93
MRPS6-201ENST00000399312 JPH4Q96JJ6 628 aa27■■□□□ 1.91
MRPS6-201ENST00000399312 IGF1RP08069 1367 aa26.99■■□□□ 1.91
MRPS6-201ENST00000399312 PRG4Q92954 1404 aaPredicted RBP26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms