Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 LINC00565-201ENST00000562710 2331 ntBASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 MIR638-201ENST00000385237 100 ntBASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 MIR4466-201ENST00000606121 54 ntBASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
YIPF4Q9BSR8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
YIPF4Q9BSR8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
YIPF4Q9BSR8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
YIPF4Q9BSR8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
YIPF4Q9BSR8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
YIPF4Q9BSR8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
YIPF4Q9BSR8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
YIPF4Q9BSR8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
YIPF4Q9BSR8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
YIPF4Q9BSR8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
YIPF4Q9BSR8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
YIPF4Q9BSR8 AC133637.1-201ENST00000624115 1537 ntBASIC20.48■□□□□ 0.87
YIPF4Q9BSR8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
YIPF4Q9BSR8 AC139530.1-201ENST00000575312 1977 ntBASIC20.47■□□□□ 0.87
YIPF4Q9BSR8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
YIPF4Q9BSR8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.47■□□□□ 0.87
YIPF4Q9BSR8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
YIPF4Q9BSR8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
YIPF4Q9BSR8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
YIPF4Q9BSR8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
YIPF4Q9BSR8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
YIPF4Q9BSR8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
YIPF4Q9BSR8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
YIPF4Q9BSR8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
YIPF4Q9BSR8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.46■□□□□ 0.87
YIPF4Q9BSR8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.46■□□□□ 0.87
YIPF4Q9BSR8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
YIPF4Q9BSR8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
YIPF4Q9BSR8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
YIPF4Q9BSR8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
YIPF4Q9BSR8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
YIPF4Q9BSR8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
YIPF4Q9BSR8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
YIPF4Q9BSR8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
YIPF4Q9BSR8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.46■□□□□ 0.87
YIPF4Q9BSR8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.46■□□□□ 0.87
YIPF4Q9BSR8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.46■□□□□ 0.87
YIPF4Q9BSR8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
YIPF4Q9BSR8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
YIPF4Q9BSR8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
YIPF4Q9BSR8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
YIPF4Q9BSR8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
YIPF4Q9BSR8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
YIPF4Q9BSR8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
YIPF4Q9BSR8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
YIPF4Q9BSR8 PKD1P6-201ENST00000343738 4769 ntBASIC20.45■□□□□ 0.86
YIPF4Q9BSR8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
YIPF4Q9BSR8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
YIPF4Q9BSR8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
YIPF4Q9BSR8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
YIPF4Q9BSR8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
YIPF4Q9BSR8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
YIPF4Q9BSR8 MIR3181-201ENST00000578512 73 ntBASIC20.45■□□□□ 0.86
YIPF4Q9BSR8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
YIPF4Q9BSR8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
YIPF4Q9BSR8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
YIPF4Q9BSR8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
YIPF4Q9BSR8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
YIPF4Q9BSR8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
YIPF4Q9BSR8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
YIPF4Q9BSR8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.44■□□□□ 0.86
YIPF4Q9BSR8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.44■□□□□ 0.86
YIPF4Q9BSR8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
YIPF4Q9BSR8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
YIPF4Q9BSR8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
YIPF4Q9BSR8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.44■□□□□ 0.86
YIPF4Q9BSR8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.43■□□□□ 0.86
YIPF4Q9BSR8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
YIPF4Q9BSR8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
YIPF4Q9BSR8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.43■□□□□ 0.86
YIPF4Q9BSR8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.43■□□□□ 0.86
YIPF4Q9BSR8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
YIPF4Q9BSR8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
YIPF4Q9BSR8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
YIPF4Q9BSR8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.43■□□□□ 0.86
YIPF4Q9BSR8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.43■□□□□ 0.86
YIPF4Q9BSR8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
YIPF4Q9BSR8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.43■□□□□ 0.86
YIPF4Q9BSR8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms