Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 OXCT2P1-201ENST00000447263 1535 ntBASIC19.76■□□□□ 0.75
SNRNP40Q96DI7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SNRNP40Q96DI7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.76■□□□□ 0.75
SNRNP40Q96DI7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.76■□□□□ 0.75
SNRNP40Q96DI7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SNRNP40Q96DI7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP40Q96DI7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP40Q96DI7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SNRNP40Q96DI7 MFSD11-216ENST00000590393 1141 ntBASIC19.76■□□□□ 0.75
SNRNP40Q96DI7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP40Q96DI7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP40Q96DI7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP40Q96DI7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.76■□□□□ 0.75
SNRNP40Q96DI7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP40Q96DI7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP40Q96DI7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP40Q96DI7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 AC142086.2-201ENST00000569753 217 ntBASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 AL121832.2-201ENST00000610979 668 ntBASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNRNP40Q96DI7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNRNP40Q96DI7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNRNP40Q96DI7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
SNRNP40Q96DI7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNRNP40Q96DI7 AC083906.2-201ENST00000511578 360 ntBASIC19.74■□□□□ 0.75
SNRNP40Q96DI7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.74■□□□□ 0.75
SNRNP40Q96DI7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.74■□□□□ 0.75
SNRNP40Q96DI7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.74■□□□□ 0.75
SNRNP40Q96DI7 AC142381.3-201ENST00000568208 1670 ntBASIC19.74■□□□□ 0.75
SNRNP40Q96DI7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNRNP40Q96DI7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.73■□□□□ 0.75
SNRNP40Q96DI7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SNRNP40Q96DI7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.73■□□□□ 0.75
SNRNP40Q96DI7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SNRNP40Q96DI7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.73■□□□□ 0.75
SNRNP40Q96DI7 TSPY20P-201ENST00000450910 630 ntBASIC19.73■□□□□ 0.75
SNRNP40Q96DI7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.73■□□□□ 0.75
SNRNP40Q96DI7 AL050303.2-201ENST00000619798 666 ntBASIC19.73■□□□□ 0.75
SNRNP40Q96DI7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNRNP40Q96DI7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNRNP40Q96DI7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.73■□□□□ 0.75
SNRNP40Q96DI7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP40Q96DI7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP40Q96DI7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP40Q96DI7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP40Q96DI7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP40Q96DI7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP40Q96DI7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.72■□□□□ 0.75
SNRNP40Q96DI7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP40Q96DI7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP40Q96DI7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP40Q96DI7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP40Q96DI7 AL353803.4-201ENST00000565882 1934 ntBASIC19.72■□□□□ 0.75
SNRNP40Q96DI7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SNRNP40Q96DI7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.72■□□□□ 0.75
SNRNP40Q96DI7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNRNP40Q96DI7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.71■□□□□ 0.75
SNRNP40Q96DI7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.71■□□□□ 0.75
SNRNP40Q96DI7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNRNP40Q96DI7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.71■□□□□ 0.75
SNRNP40Q96DI7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNRNP40Q96DI7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.71■□□□□ 0.75
SNRNP40Q96DI7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNRNP40Q96DI7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNRNP40Q96DI7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNRNP40Q96DI7 TSPY6P-201ENST00000448518 926 ntBASIC19.71■□□□□ 0.75
SNRNP40Q96DI7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.71■□□□□ 0.75
SNRNP40Q96DI7 AC104187.1-201ENST00000607510 612 ntBASIC19.71■□□□□ 0.75
SNRNP40Q96DI7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNRNP40Q96DI7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNRNP40Q96DI7 AC231657.2-201ENST00000624556 255 ntBASIC19.71■□□□□ 0.75
SNRNP40Q96DI7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNRNP40Q96DI7 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.71■□□□□ 0.75
SNRNP40Q96DI7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNRNP40Q96DI7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SNRNP40Q96DI7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNRNP40Q96DI7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.7■□□□□ 0.74
SNRNP40Q96DI7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNRNP40Q96DI7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNRNP40Q96DI7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNRNP40Q96DI7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.7■□□□□ 0.74
SNRNP40Q96DI7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms