Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1BO75841 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1BO75841 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.07■□□□□ 0.64
UPK1BO75841 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1BO75841 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1BO75841 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1BO75841 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1BO75841 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1BO75841 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1BO75841 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1BO75841 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
UPK1BO75841 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1BO75841 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1BO75841 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1BO75841 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
UPK1BO75841 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1BO75841 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1BO75841 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
UPK1BO75841 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1BO75841 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1BO75841 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1BO75841 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.05■□□□□ 0.64
UPK1BO75841 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.05■□□□□ 0.64
UPK1BO75841 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1BO75841 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1BO75841 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1BO75841 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.05■□□□□ 0.64
UPK1BO75841 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1BO75841 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1BO75841 MIR3960-201ENST00000583311 91 ntBASIC19.05■□□□□ 0.64
UPK1BO75841 AC021231.2-201ENST00000594613 730 ntBASIC19.05■□□□□ 0.64
UPK1BO75841 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1BO75841 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1BO75841 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1BO75841 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
UPK1BO75841 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
UPK1BO75841 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1BO75841 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1BO75841 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.04■□□□□ 0.64
UPK1BO75841 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.04■□□□□ 0.64
UPK1BO75841 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1BO75841 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.04■□□□□ 0.64
UPK1BO75841 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.04■□□□□ 0.64
UPK1BO75841 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
UPK1BO75841 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
UPK1BO75841 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1BO75841 HLA-V-202ENST00000446817 847 ntBASIC19.04■□□□□ 0.64
UPK1BO75841 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1BO75841 AC087289.5-201ENST00000586076 3175 ntBASIC19.04■□□□□ 0.64
UPK1BO75841 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
UPK1BO75841 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1BO75841 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.04■□□□□ 0.64
UPK1BO75841 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UPK1BO75841 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.04■□□□□ 0.64
UPK1BO75841 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPK1BO75841 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.03■□□□□ 0.64
UPK1BO75841 AC090877.2-201ENST00000558441 1738 ntBASIC19.03■□□□□ 0.64
UPK1BO75841 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPK1BO75841 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPK1BO75841 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.03■□□□□ 0.64
UPK1BO75841 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPK1BO75841 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPK1BO75841 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPK1BO75841 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPK1BO75841 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
UPK1BO75841 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UPK1BO75841 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.03■□□□□ 0.64
UPK1BO75841 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UPK1BO75841 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UPK1BO75841 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPK1BO75841 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
UPK1BO75841 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UPK1BO75841 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPK1BO75841 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPK1BO75841 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPK1BO75841 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UPK1BO75841 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UPK1BO75841 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UPK1BO75841 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UPK1BO75841 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPK1BO75841 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
UPK1BO75841 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.01■□□□□ 0.63
UPK1BO75841 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
UPK1BO75841 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPK1BO75841 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPK1BO75841 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPK1BO75841 AC025884.2-201ENST00000553429 711 ntBASIC19.01■□□□□ 0.63
UPK1BO75841 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPK1BO75841 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
UPK1BO75841 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
UPK1BO75841 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
UPK1BO75841 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
UPK1BO75841 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPK1BO75841 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPK1BO75841 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UPK1BO75841 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19■□□□□ 0.63
UPK1BO75841 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19■□□□□ 0.63
UPK1BO75841 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPK1BO75841 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19■□□□□ 0.63
UPK1BO75841 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms