Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 MMR1YLR190W 1476 nt4.48□□□□□ -1.69
TY1B-HO13535 SRP40YKR092C 1221 nt4.48□□□□□ -1.69
TY1B-HO13535 TOM7YNL070W 183 nt4.48□□□□□ -1.69
TY1B-HO13535 YPL150WYPL150W 2706 nt4.48□□□□□ -1.69
TY1B-HO13535 ABD1YBR236C 1311 nt4.48□□□□□ -1.69
TY1B-HO13535 CWH41YGL027C 2502 nt4.48□□□□□ -1.69
TY1B-HO13535 RSM24YDR175C 960 nt4.48□□□□□ -1.69
TY1B-HO13535 YGR016WYGR016W 573 nt4.48□□□□□ -1.69
TY1B-HO13535 YHR052W-AYHR052W-A 195 nt4.48□□□□□ -1.69
TY1B-HO13535 YHR054W-AYHR054W-A 195 nt4.48□□□□□ -1.69
TY1B-HO13535 CSM3YMR048W 954 nt4.48□□□□□ -1.69
TY1B-HO13535 ATG2YNL242W 4779 nt4.47□□□□□ -1.69
TY1B-HO13535 PAM18YLR008C 507 nt4.47□□□□□ -1.69
TY1B-HO13535 TRE1YPL176C 2352 nt4.47□□□□□ -1.69
TY1B-HO13535 MDM34YGL219C 1380 nt4.46□□□□□ -1.7
TY1B-HO13535 BCP1YDR361C 852 nt4.46□□□□□ -1.7
TY1B-HO13535 YLR346CYLR346C 306 nt4.46□□□□□ -1.7
TY1B-HO13535 YDL180WYDL180W 1644 nt4.46□□□□□ -1.7
TY1B-HO13535 YOR283WYOR283W 693 nt4.45□□□□□ -1.7
TY1B-HO13535 PMS1YNL082W 2622 nt4.45□□□□□ -1.7
TY1B-HO13535 VAC7YNL054W 3498 nt4.45□□□□□ -1.7
TY1B-HO13535 DCS1YLR270W 1053 nt4.45□□□□□ -1.7
TY1B-HO13535 ARP4YJL081C 1470 nt4.45□□□□□ -1.7
TY1B-HO13535 TFB2YPL122C 1542 nt4.44□□□□□ -1.7
TY1B-HO13535 AIM25YJR100C 984 nt4.44□□□□□ -1.7
TY1B-HO13535 FRE7YOL152W 1863 nt4.44□□□□□ -1.7
TY1B-HO13535 PSK2YOL045W 3306 nt4.43□□□□□ -1.7
TY1B-HO13535 TRM44YPL030W 1704 nt4.43□□□□□ -1.7
TY1B-HO13535 DCV1YFR012W 609 nt4.43□□□□□ -1.7
TY1B-HO13535 IDP2YLR174W 1239 nt4.43□□□□□ -1.7
TY1B-HO13535 YFL040WYFL040W 1623 nt4.43□□□□□ -1.7
TY1B-HO13535 CIT1YNR001C 1440 nt4.43□□□□□ -1.7
TY1B-HO13535 SHH3YMR118C 591 nt4.42□□□□□ -1.7
TY1B-HO13535 ADD37YMR184W 597 nt4.42□□□□□ -1.7
TY1B-HO13535 ATG3YNR007C 933 nt4.42□□□□□ -1.7
TY1B-HO13535 ARO10YDR380W 1908 nt4.42□□□□□ -1.7
TY1B-HO13535 ESL2YKR096W 3588 nt4.42□□□□□ -1.7
TY1B-HO13535 YDR186CYDR186C 2634 nt4.42□□□□□ -1.7
TY1B-HO13535 SAC1YKL212W 1872 nt4.42□□□□□ -1.7
TY1B-HO13535 YIR020W-AYIR020W-A 243 nt4.42□□□□□ -1.7
TY1B-HO13535 TOM40YMR203W 1164 nt4.42□□□□□ -1.7
TY1B-HO13535 AYT1YLL063C 1425 nt4.42□□□□□ -1.7
TY1B-HO13535 ATP5YDR298C 639 nt4.41□□□□□ -1.7
TY1B-HO13535 RRP46YGR095C 672 nt4.41□□□□□ -1.7
TY1B-HO13535 SME1YOR159C 285 nt4.41□□□□□ -1.7
TY1B-HO13535 SNF3YDL194W 2655 nt4.41□□□□□ -1.7
TY1B-HO13535 CHS2YBR038W 2892 nt4.41□□□□□ -1.7
TY1B-HO13535 KTR7YIL085C 1554 nt4.41□□□□□ -1.7
TY1B-HO13535 ENA5YDR038C 3276 nt4.4□□□□□ -1.7
TY1B-HO13535 PEF1YGR058W 1008 nt4.4□□□□□ -1.7
TY1B-HO13535 SPO16YHR153C 597 nt4.4□□□□□ -1.71
TY1B-HO13535 YGR079WYGR079W 1113 nt4.39□□□□□ -1.71
TY1B-HO13535 YMR315WYMR315W 1050 nt4.39□□□□□ -1.71
TY1B-HO13535 TSC11YER093C 4293 nt4.39□□□□□ -1.71
TY1B-HO13535 HEF3YNL014W 3135 nt4.38□□□□□ -1.71
TY1B-HO13535 snR70snR70 164 nt4.38□□□□□ -1.71
TY1B-HO13535 YPR050CYPR050C 414 nt4.38□□□□□ -1.71
TY1B-HO13535 SEC9YGR009C 1956 nt4.38□□□□□ -1.71
TY1B-HO13535 YMR294W-AYMR294W-A 360 nt4.37□□□□□ -1.71
TY1B-HO13535 CUZ1YNL155W 825 nt4.37□□□□□ -1.71
TY1B-HO13535 YPL168WYPL168W 1293 nt4.37□□□□□ -1.71
TY1B-HO13535 SPC97YHR172W 2472 nt4.37□□□□□ -1.71
TY1B-HO13535 ICY1YMR195W 384 nt4.37□□□□□ -1.71
TY1B-HO13535 ATG7YHR171W 1893 nt4.36□□□□□ -1.71
TY1B-HO13535 TRS85YDR108W 2097 nt4.36□□□□□ -1.71
TY1B-HO13535 APL6YGR261C 2430 nt4.36□□□□□ -1.71
TY1B-HO13535 CIN8YEL061C 3003 nt4.36□□□□□ -1.71
TY1B-HO13535 RAX2YLR084C 3663 nt4.36□□□□□ -1.71
TY1B-HO13535 SLD2YKL108W 1362 nt4.36□□□□□ -1.71
TY1B-HO13535 YKR070WYKR070W 1059 nt4.35□□□□□ -1.71
TY1B-HO13535 YBR298C-AYBR298C-A 222 nt4.35□□□□□ -1.71
TY1B-HO13535 KRS1YDR037W 1776 nt4.34□□□□□ -1.71
TY1B-HO13535 DEF1YKL054C 2217 nt4.34□□□□□ -1.71
TY1B-HO13535 RPA135YPR010C 3612 nt4.34□□□□□ -1.71
TY1B-HO13535 YLR278CYLR278C 4026 nt4.34□□□□□ -1.71
TY1B-HO13535 BUD5YCR038C 1929 nt4.34□□□□□ -1.71
TY1B-HO13535 SPP41YDR464W 4308 nt4.34□□□□□ -1.71
TY1B-HO13535 PSF1YDR013W 627 nt4.34□□□□□ -1.71
TY1B-HO13535 CAJ1YER048C 1176 nt4.34□□□□□ -1.71
TY1B-HO13535 FYV5YCL058C 459 nt4.34□□□□□ -1.71
TY1B-HO13535 PRP22YER013W 3438 nt4.34□□□□□ -1.72
TY1B-HO13535 VPS17YOR132W 1656 nt4.34□□□□□ -1.72
TY1B-HO13535 YPR003CYPR003C 2265 nt4.34□□□□□ -1.72
TY1B-HO13535 PTP3YER075C 2787 nt4.33□□□□□ -1.72
TY1B-HO13535 DBF2YGR092W 1719 nt4.33□□□□□ -1.72
TY1B-HO13535 NTH1YDR001C 2256 nt4.33□□□□□ -1.72
TY1B-HO13535 ATG27YJL178C 816 nt4.33□□□□□ -1.72
TY1B-HO13535 DOM34YNL001W 1161 nt4.33□□□□□ -1.72
TY1B-HO13535 OM14YBR230C 405 nt4.33□□□□□ -1.72
TY1B-HO13535 UBP1YDL122W 2430 nt4.32□□□□□ -1.72
TY1B-HO13535 PDE1YGL248W 1110 nt4.32□□□□□ -1.72
TY1B-HO13535 YGR122WYGR122W 1209 nt4.32□□□□□ -1.72
TY1B-HO13535 YHL005CYHL005C 393 nt4.32□□□□□ -1.72
TY1B-HO13535 SAW1YAL027W 786 nt4.32□□□□□ -1.72
TY1B-HO13535 GPI1YGR216C 1830 nt4.32□□□□□ -1.72
TY1B-HO13535 DBP3YGL078C 1572 nt4.32□□□□□ -1.72
TY1B-HO13535 PEX1YKL197C 3132 nt4.32□□□□□ -1.72
TY1B-HO13535 FAP7YDL166C 594 nt4.32□□□□□ -1.72
TY1B-HO13535 RPL23AYBL087C 414 nt4.32□□□□□ -1.72
TY1B-HO13535 SSA2YLL024C 1920 nt4.32□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 35.6 ms