RNA–Protein interactions for RNA: YHR171W

ATG7, Transcript of Autophagy-related protein and dual specificity member of the E1 family, yeastyeast

Gene ATG7, Length 1,893 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG7YHR171W DRS1P32892 752 aaKnown RBP12.61□□□□□ -0.39
ATG7YHR171W TFA1P36100 482 aa11.73□□□□□ -0.53
ATG7YHR171W BFR2Q06631 534 aaKnown RBP11.46□□□□□ -0.57
ATG7YHR171W MTC1P47018 478 aaKnown RBP11.27□□□□□ -0.6
ATG7YHR171W RQC2Q12532 1038 aaKnown RBP11.13□□□□□ -0.63
ATG7YHR171W TAF7Q05021 590 aa10.79□□□□□ -0.68
ATG7YHR171W AVT3P36062 692 aa10.59□□□□□ -0.71
ATG7YHR171W DIP2Q12220 943 aaPredicted RBP10.3□□□□□ -0.76
ATG7YHR171W DMA1P38823 416 aa10.16□□□□□ -0.78
ATG7YHR171W LEO1P38439 464 aa9.94□□□□□ -0.82
ATG7YHR171W LEU3P08638 886 aa9.39□□□□□ -0.91
ATG7YHR171W PTP3P40048 928 aa9.38□□□□□ -0.91
ATG7YHR171W RSE1Q04693 1361 aaKnown RBP9.33□□□□□ -0.92
ATG7YHR171W SAS10Q12136 610 aaPredicted RBP9.24□□□□□ -0.93
ATG7YHR171W DMA2P53924 522 aa9.17□□□□□ -0.94
ATG7YHR171W ABP1P15891 592 aaKnown RBP9.14□□□□□ -0.95
ATG7YHR171W SSP1P38871 571 aa9.05□□□□□ -0.96
ATG7YHR171W IFH1P39520 1085 aa9□□□□□ -0.97
ATG7YHR171W RPN1P38764 993 aaKnown RBP8.98□□□□□ -0.97
ATG7YHR171W RLF2Q12495 606 aa8.98□□□□□ -0.97
ATG7YHR171W RPL17AP05740 184 aaKnown RBP8.91□□□□□ -0.98
ATG7YHR171W RPL17BP46990 184 aaKnown RBP8.91□□□□□ -0.98
ATG7YHR171W RIM101P33400 625 aa8.91□□□□□ -0.98
ATG7YHR171W NAP1P25293 417 aaKnown RBP8.83□□□□□ -1
ATG7YHR171W ISW2Q08773 1120 aa8.81□□□□□ -1
ATG7YHR171W AIM44Q99299 758 aa8.81□□□□□ -1
ATG7YHR171W SPT21P35209 758 aa8.79□□□□□ -1
ATG7YHR171W IOC4Q04213 475 aa8.79□□□□□ -1
ATG7YHR171W CKB1P43639 278 aa8.77□□□□□ -1.01
ATG7YHR171W ORC1P54784 914 aaPredicted RBP8.76□□□□□ -1.01
ATG7YHR171W OXP1P28273 1286 aa8.7□□□□□ -1.02
ATG7YHR171W RPG1P38249 964 aaKnown RBP8.7□□□□□ -1.02
ATG7YHR171W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
ATG7YHR171W YLR271WQ06152 274 aa8.68□□□□□ -1.02
ATG7YHR171W YAH1Q12184 172 aaKnown RBP8.66□□□□□ -1.02
ATG7YHR171W REB1P21538 810 aa8.64□□□□□ -1.03
ATG7YHR171W MGA2P40578 1113 aa8.6□□□□□ -1.03
ATG7YHR171W SPB4P25808 606 aaPredicted RBP8.57□□□□□ -1.04
ATG7YHR171W YML020WQ03722 664 aa8.57□□□□□ -1.04
ATG7YHR171W NOP8Q08287 484 aaPredicted RBP8.55□□□□□ -1.04
ATG7YHR171W CST9Q06032 482 aa8.49□□□□□ -1.05
ATG7YHR171W YPR148CQ06523 435 aa8.49□□□□□ -1.05
ATG7YHR171W KIN1P13185 1064 aa8.47□□□□□ -1.05
ATG7YHR171W VPS70P47161 811 aa8.45□□□□□ -1.06
ATG7YHR171W YIL055CP40523 627 aaKnown RBP8.43□□□□□ -1.06
ATG7YHR171W FAP1P53971 965 aa8.43□□□□□ -1.06
ATG7YHR171W DSF2P38213 736 aa8.4□□□□□ -1.06
ATG7YHR171W SET1P38827 1080 aaKnown RBP8.4□□□□□ -1.06
ATG7YHR171W SLX8P40072 274 aa8.4□□□□□ -1.07
ATG7YHR171W YNR021WP53723 404 aaKnown RBP8.38□□□□□ -1.07
ATG7YHR171W HGH1P48362 394 aaKnown RBP8.36□□□□□ -1.07
ATG7YHR171W RSM7P47150 247 aa8.36□□□□□ -1.07
ATG7YHR171W RAM2P29703 316 aa8.34□□□□□ -1.07
ATG7YHR171W GEF1P37020 779 aa8.34□□□□□ -1.07
ATG7YHR171W PRI1P10363 409 aa8.33□□□□□ -1.08
ATG7YHR171W SSA1P10591 642 aaKnown RBP8.32□□□□□ -1.08
ATG7YHR171W URN1Q06525 465 aaKnown RBP8.32□□□□□ -1.08
ATG7YHR171W GUA1P38625 525 aaKnown RBP8.31□□□□□ -1.08
ATG7YHR171W AIM7Q12156 149 aa8.31□□□□□ -1.08
ATG7YHR171W GLC3P32775 704 aa8.3□□□□□ -1.08
ATG7YHR171W PSD2P53037 1138 aaKnown RBP8.3□□□□□ -1.08
ATG7YHR171W PBS2P08018 668 aa8.29□□□□□ -1.08
ATG7YHR171W MAM3Q12296 706 aa8.29□□□□□ -1.08
ATG7YHR171W SUB2Q07478 446 aaKnown RBP8.28□□□□□ -1.08
ATG7YHR171W MRX12P47084 519 aa8.26□□□□□ -1.09
ATG7YHR171W NOP7P53261 605 aaKnown RBP8.26□□□□□ -1.09
ATG7YHR171W TOP1P04786 769 aa8.2□□□□□ -1.1
ATG7YHR171W YKR023WP36119 530 aaKnown RBP8.2□□□□□ -1.1
ATG7YHR171W HPC2Q01448 625 aa8.19□□□□□ -1.1
ATG7YHR171W DIT2P21595 489 aa8.17□□□□□ -1.1
ATG7YHR171W NUP42P49686 430 aaKnown RBP8.17□□□□□ -1.1
ATG7YHR171W PAM1P37304 830 aaKnown RBP8.16□□□□□ -1.1
ATG7YHR171W TFB3Q03290 321 aa8.16□□□□□ -1.1
ATG7YHR171W IES2P40154 320 aa8.15□□□□□ -1.1
ATG7YHR171W SNU71P53207 620 aaKnown RBP8.15□□□□□ -1.1
ATG7YHR171W AI2P03876 854 aa8.13□□□□□ -1.11
ATG7YHR171W RCR1P38212 213 aa8.11□□□□□ -1.11
ATG7YHR171W MAK21Q12176 1025 aaKnown RBP8.11□□□□□ -1.11
ATG7YHR171W MET10P39692 1035 aa8.09□□□□□ -1.11
ATG7YHR171W PKC1P24583 1151 aa8.09□□□□□ -1.12
ATG7YHR171W SLD2P34252 453 aa8.07□□□□□ -1.12
ATG7YHR171W BRL1P38770 471 aa8.07□□□□□ -1.12
ATG7YHR171W GLN1P32288 370 aaKnown RBP8.06□□□□□ -1.12
ATG7YHR171W RRN6P32786 894 aa8.06□□□□□ -1.12
ATG7YHR171W YTA7P40340 1379 aa8.05□□□□□ -1.12
ATG7YHR171W MAK11P20484 414 aaKnown RBP8.04□□□□□ -1.12
ATG7YHR171W SSA4P22202 642 aaKnown RBP8.04□□□□□ -1.12
ATG7YHR171W BIM1P40013 344 aa8.04□□□□□ -1.12
ATG7YHR171W YRB30P53107 440 aaPredicted RBP8.03□□□□□ -1.12
ATG7YHR171W SEN54Q02825 467 aaPredicted RBP8.03□□□□□ -1.12
ATG7YHR171W BRN1P38170 754 aa8.02□□□□□ -1.13
ATG7YHR171W ATG32P40458 529 aa8.02□□□□□ -1.13
ATG7YHR171W ATF2P53296 535 aa8.02□□□□□ -1.13
ATG7YHR171W ATG36P46983 293 aa8.01□□□□□ -1.13
ATG7YHR171W REF2P42073 533 aaPredicted RBP8□□□□□ -1.13
ATG7YHR171W FAR11P53917 953 aa8□□□□□ -1.13
ATG7YHR171W TFC8Q12308 588 aa8□□□□□ -1.13
ATG7YHR171W SPC42P36094 363 aa8□□□□□ -1.13
ATG7YHR171W SSF1P38789 453 aaPredicted RBP8□□□□□ -1.13
ATG7YHR171W HOP09932 586 aa7.99□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms