RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W MTC1P47018 478 aaKnown RBP12.01□□□□□ -0.49
VPS17YOR132W DRS1P32892 752 aaKnown RBP11.79□□□□□ -0.52
VPS17YOR132W FAP1P53971 965 aa10.63□□□□□ -0.71
VPS17YOR132W DIP2Q12220 943 aaPredicted RBP10.13□□□□□ -0.79
VPS17YOR132W BFR2Q06631 534 aaKnown RBP10.09□□□□□ -0.79
VPS17YOR132W PRI1P10363 409 aa10.02□□□□□ -0.8
VPS17YOR132W PRY3P47033 881 aa9.99□□□□□ -0.81
VPS17YOR132W AAD16Q02895 342 aa9.94□□□□□ -0.82
VPS17YOR132W AVT3P36062 692 aa9.91□□□□□ -0.82
VPS17YOR132W ISW2Q08773 1120 aa9.86□□□□□ -0.83
VPS17YOR132W RPG1P38249 964 aaKnown RBP9.79□□□□□ -0.84
VPS17YOR132W RSE1Q04693 1361 aaKnown RBP9.64□□□□□ -0.87
VPS17YOR132W YCK3P39962 524 aa9.49□□□□□ -0.89
VPS17YOR132W TSR3Q12094 313 aaKnown RBP9.48□□□□□ -0.89
VPS17YOR132W HAA1Q12753 694 aaKnown RBP9.36□□□□□ -0.91
VPS17YOR132W RPL17AP05740 184 aaKnown RBP9.29□□□□□ -0.92
VPS17YOR132W TFA1P36100 482 aa9.29□□□□□ -0.92
VPS17YOR132W RPL17BP46990 184 aaKnown RBP9.29□□□□□ -0.92
VPS17YOR132W REB1P21538 810 aa9.22□□□□□ -0.93
VPS17YOR132W MRPL32P25348 183 aa9.09□□□□□ -0.95
VPS17YOR132W SPT21P35209 758 aa8.91□□□□□ -0.98
VPS17YOR132W RIM101P33400 625 aa8.75□□□□□ -1.01
VPS17YOR132W YGL015CP33199 130 aa8.69□□□□□ -1.02
VPS17YOR132W YKR023WP36119 530 aaKnown RBP8.69□□□□□ -1.02
VPS17YOR132W CDC27P38042 758 aa8.69□□□□□ -1.02
VPS17YOR132W TFC8Q12308 588 aa8.53□□□□□ -1.04
VPS17YOR132W HOP09932 586 aa8.51□□□□□ -1.05
VPS17YOR132W DCD1P06773 312 aa8.48□□□□□ -1.05
VPS17YOR132W OXP1P28273 1286 aa8.45□□□□□ -1.06
VPS17YOR132W MAP2P38174 421 aaKnown RBP8.4□□□□□ -1.07
VPS17YOR132W YIL055CP40523 627 aaKnown RBP8.39□□□□□ -1.07
VPS17YOR132W UBP10P53874 792 aaPredicted RBP8.39□□□□□ -1.07
VPS17YOR132W PTP3P40048 928 aa8.33□□□□□ -1.08
VPS17YOR132W YAH1Q12184 172 aaKnown RBP8.3□□□□□ -1.08
VPS17YOR132W BCH2P36122 765 aa8.26□□□□□ -1.09
VPS17YOR132W SSP1P38871 571 aa8.25□□□□□ -1.09
VPS17YOR132W RSM7P47150 247 aa8.24□□□□□ -1.09
VPS17YOR132W SCY1P53009 804 aa8.24□□□□□ -1.09
VPS17YOR132W YLR271WQ06152 274 aa8.18□□□□□ -1.1
VPS17YOR132W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
VPS17YOR132W SLX5P32828 619 aaKnown RBP8.11□□□□□ -1.11
VPS17YOR132W AI2P03876 854 aa8.1□□□□□ -1.11
VPS17YOR132W EPS1P40557 701 aa8.1□□□□□ -1.11
VPS17YOR132W BBC1P47068 1157 aa8.1□□□□□ -1.11
VPS17YOR132W BDF1P35817 686 aa8.05□□□□□ -1.12
VPS17YOR132W TIF4632P39936 914 aaKnown RBP8.04□□□□□ -1.12
VPS17YOR132W TGL3P40308 642 aa8.02□□□□□ -1.13
VPS17YOR132W MGA2P40578 1113 aa7.99□□□□□ -1.13
VPS17YOR132W PSD2P53037 1138 aaKnown RBP7.99□□□□□ -1.13
VPS17YOR132W BUD31P25337 157 aaPredicted RBP7.92□□□□□ -1.14
VPS17YOR132W CST9Q06032 482 aa7.91□□□□□ -1.14
VPS17YOR132W MRM1P25270 412 aa7.84□□□□□ -1.15
VPS17YOR132W RTG3P38165 486 aa7.73□□□□□ -1.17
VPS17YOR132W NSR1P27476 414 aaKnown RBP RIP-Chip data7.72□□□□□ -1.17not detected
VPS17YOR132W UBP9P39967 754 aa7.72□□□□□ -1.17
VPS17YOR132W MST1P07236 462 aa7.7□□□□□ -1.18
VPS17YOR132W YAP5P40574 245 aa7.68□□□□□ -1.18
VPS17YOR132W YOR238WQ08634 303 aa7.67□□□□□ -1.18
VPS17YOR132W RCR1P38212 213 aa7.65□□□□□ -1.18
VPS17YOR132W VPS29P38759 282 aa7.65□□□□□ -1.18
VPS17YOR132W RQC2Q12532 1038 aaKnown RBP7.65□□□□□ -1.18
VPS17YOR132W YMR1P47147 688 aaKnown RBP RIP-Chip data7.63□□□□□ -1.19not detected
VPS17YOR132W RAM2P29703 316 aa7.59□□□□□ -1.19
VPS17YOR132W DBP1P24784 617 aaKnown RBP7.57□□□□□ -1.2
VPS17YOR132W YBL029C-AQ3E756 94 aa7.56□□□□□ -1.2
VPS17YOR132W SIS1P25294 352 aaKnown RBP7.55□□□□□ -1.2
VPS17YOR132W DMA1P38823 416 aa7.54□□□□□ -1.2
VPS17YOR132W PIB1Q06651 286 aa7.54□□□□□ -1.2
VPS17YOR132W STS1P38637 319 aa7.54□□□□□ -1.2
VPS17YOR132W YFR006WP43590 535 aa7.54□□□□□ -1.2
VPS17YOR132W MAK11P20484 414 aaKnown RBP7.53□□□□□ -1.2
VPS17YOR132W GTT3P39996 337 aa7.51□□□□□ -1.21
VPS17YOR132W VNX1P42839 908 aa7.49□□□□□ -1.21
VPS17YOR132W WSC3Q12215 556 aa7.47□□□□□ -1.21
VPS17YOR132W VMA1P17255 1071 aaKnown RBP7.44□□□□□ -1.22
VPS17YOR132W MIF2P35201 549 aa7.43□□□□□ -1.22
VPS17YOR132W COQ8P27697 501 aa7.41□□□□□ -1.22
VPS17YOR132W SPP1Q03012 353 aa7.41□□□□□ -1.22
VPS17YOR132W SET1P38827 1080 aaKnown RBP7.38□□□□□ -1.23
VPS17YOR132W SAM3Q08986 587 aa7.38□□□□□ -1.23
VPS17YOR132W NOP53Q12080 455 aaKnown RBP7.37□□□□□ -1.23
VPS17YOR132W EDS1P38073 919 aa7.36□□□□□ -1.23
VPS17YOR132W TIF11P38912 153 aaKnown RBP7.35□□□□□ -1.23
VPS17YOR132W MSB4Q12317 492 aa7.35□□□□□ -1.23
VPS17YOR132W PTC3P34221 468 aaKnown RBP7.34□□□□□ -1.23
VPS17YOR132W YOL036WQ08206 761 aa7.34□□□□□ -1.23
VPS17YOR132W SET4P42948 560 aa7.32□□□□□ -1.24
VPS17YOR132W GYP5Q12344 894 aa7.32□□□□□ -1.24
VPS17YOR132W IFH1P39520 1085 aa7.3□□□□□ -1.24
VPS17YOR132W GRE2Q12068 342 aaKnown RBP7.3□□□□□ -1.24
VPS17YOR132W ABP1P15891 592 aaKnown RBP7.29□□□□□ -1.24
VPS17YOR132W EAP1P36041 632 aaKnown RBP7.29□□□□□ -1.24
VPS17YOR132W ULI1P43604 169 aa7.28□□□□□ -1.24
VPS17YOR132W ATH1P48016 1211 aa7.28□□□□□ -1.24
VPS17YOR132W IOC2Q12072 812 aa7.27□□□□□ -1.25
VPS17YOR132W GUT1P32190 709 aa7.26□□□□□ -1.25
VPS17YOR132W LDB19Q12502 818 aa7.25□□□□□ -1.25
VPS17YOR132W DCW1P36091 449 aa7.24□□□□□ -1.25
VPS17YOR132W SAS10Q12136 610 aaPredicted RBP7.24□□□□□ -1.25
VPS17YOR132W HTA1P04911 132 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms