RNA–Protein interactions for RNA: YCR038C

BUD5, Transcript of GTP/GDP exchange factor for Rsr1p (Bud1p), yeastyeast

Gene BUD5, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD5YCR038C FAP1P53971 965 aa10.56□□□□□ -0.72
BUD5YCR038C MTC1P47018 478 aaKnown RBP10.1□□□□□ -0.79
BUD5YCR038C PRY3P47033 881 aa9.95□□□□□ -0.82
BUD5YCR038C AAD16Q02895 342 aa9.32□□□□□ -0.92
BUD5YCR038C YCK3P39962 524 aa9.24□□□□□ -0.93
BUD5YCR038C HAA1Q12753 694 aaKnown RBP9.24□□□□□ -0.93
BUD5YCR038C PRI1P10363 409 aa9.19□□□□□ -0.94
BUD5YCR038C DRS1P32892 752 aaKnown RBP8.76□□□□□ -1.01
BUD5YCR038C ISW2Q08773 1120 aa8.68□□□□□ -1.02
BUD5YCR038C TSR3Q12094 313 aaKnown RBP8.66□□□□□ -1.02
BUD5YCR038C RPG1P38249 964 aaKnown RBP8.62□□□□□ -1.03
BUD5YCR038C MRPL32P25348 183 aa8.35□□□□□ -1.07
BUD5YCR038C YGL015CP33199 130 aa8.33□□□□□ -1.08
BUD5YCR038C BUD31P25337 157 aaPredicted RBP8.13□□□□□ -1.11
BUD5YCR038C RSE1Q04693 1361 aaKnown RBP7.77□□□□□ -1.17
BUD5YCR038C REB1P21538 810 aa7.72□□□□□ -1.17
BUD5YCR038C SIS1P25294 352 aaKnown RBP7.7□□□□□ -1.18
BUD5YCR038C DIP2Q12220 943 aaPredicted RBP7.66□□□□□ -1.18
BUD5YCR038C CDC27P38042 758 aa7.66□□□□□ -1.18
BUD5YCR038C RPL17AP05740 184 aaKnown RBP7.62□□□□□ -1.19
BUD5YCR038C RPL17BP46990 184 aaKnown RBP7.62□□□□□ -1.19
BUD5YCR038C UBP10P53874 792 aaPredicted RBP7.61□□□□□ -1.19
BUD5YCR038C MAP2P38174 421 aaKnown RBP7.58□□□□□ -1.2
BUD5YCR038C UBP9P39967 754 aa7.5□□□□□ -1.21
BUD5YCR038C BFR2Q06631 534 aaKnown RBP7.42□□□□□ -1.22
BUD5YCR038C AVT3P36062 692 aa7.4□□□□□ -1.23
BUD5YCR038C TIF4632P39936 914 aaKnown RBP7.35□□□□□ -1.23
BUD5YCR038C YKR023WP36119 530 aaKnown RBP7.33□□□□□ -1.24
BUD5YCR038C TGL3P40308 642 aa7.29□□□□□ -1.24
BUD5YCR038C TFA1P36100 482 aa7.28□□□□□ -1.24
BUD5YCR038C RQC2Q12532 1038 aaKnown RBP7.25□□□□□ -1.25
BUD5YCR038C HOP09932 586 aa7.23□□□□□ -1.25
BUD5YCR038C SCY1P53009 804 aa7.23□□□□□ -1.25
BUD5YCR038C DCD1P06773 312 aa7.22□□□□□ -1.25
BUD5YCR038C SLX5P32828 619 aaKnown RBP7.21□□□□□ -1.25
BUD5YCR038C TFC8Q12308 588 aa7.19□□□□□ -1.26
BUD5YCR038C SPT21P35209 758 aa7.11□□□□□ -1.27
BUD5YCR038C TAF7Q05021 590 aa7.04□□□□□ -1.28
BUD5YCR038C YBL029C-AQ3E756 94 aa6.95□□□□□ -1.3
BUD5YCR038C BCH2P36122 765 aa6.9□□□□□ -1.3
BUD5YCR038C VNX1P42839 908 aa6.8□□□□□ -1.32
BUD5YCR038C YJL171CP46992 396 aa6.8□□□□□ -1.32
BUD5YCR038C MST1P07236 462 aa6.8□□□□□ -1.32
BUD5YCR038C YOR238WQ08634 303 aa6.79□□□□□ -1.32
BUD5YCR038C SPP1Q03012 353 aa6.77□□□□□ -1.33
BUD5YCR038C AIR2Q12476 344 aaKnown RBP6.72□□□□□ -1.33
BUD5YCR038C WSC3Q12215 556 aa6.7□□□□□ -1.34
BUD5YCR038C EPS1P40557 701 aa6.66□□□□□ -1.34
BUD5YCR038C BDF1P35817 686 aa6.66□□□□□ -1.34
BUD5YCR038C FKH1P40466 484 aa6.66□□□□□ -1.34
BUD5YCR038C RIM101P33400 625 aa6.61□□□□□ -1.35
BUD5YCR038C TIF11P38912 153 aaKnown RBP6.6□□□□□ -1.35
BUD5YCR038C BMT6Q12291 365 aa6.57□□□□□ -1.36
BUD5YCR038C NSR1P27476 414 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
BUD5YCR038C YAP5P40574 245 aa6.56□□□□□ -1.36
BUD5YCR038C GTT3P39996 337 aa6.51□□□□□ -1.37
BUD5YCR038C LDB19Q12502 818 aa6.51□□□□□ -1.37
BUD5YCR038C ULI1P43604 169 aa6.46□□□□□ -1.38
BUD5YCR038C IOC2Q12072 812 aa6.4□□□□□ -1.38
BUD5YCR038C PTP3P40048 928 aa6.38□□□□□ -1.39
BUD5YCR038C OXP1P28273 1286 aa6.38□□□□□ -1.39
BUD5YCR038C BBC1P47068 1157 aa6.37□□□□□ -1.39
BUD5YCR038C LEO1P38439 464 aa6.35□□□□□ -1.39
BUD5YCR038C DMA1P38823 416 aa6.35□□□□□ -1.39
BUD5YCR038C YIL055CP40523 627 aaKnown RBP6.34□□□□□ -1.39
BUD5YCR038C RTG1P32607 177 aa6.29□□□□□ -1.4
BUD5YCR038C NCR1Q12200 1170 aa6.27□□□□□ -1.41
BUD5YCR038C PIB1Q06651 286 aa6.27□□□□□ -1.41
BUD5YCR038C EAP1P36041 632 aaKnown RBP6.26□□□□□ -1.41
BUD5YCR038C AI2P03876 854 aa6.25□□□□□ -1.41
BUD5YCR038C MSB4Q12317 492 aa6.24□□□□□ -1.41
BUD5YCR038C YAH1Q12184 172 aaKnown RBP6.22□□□□□ -1.41
BUD5YCR038C BCK2P33306 851 aa6.21□□□□□ -1.41
BUD5YCR038C RSM7P47150 247 aa6.21□□□□□ -1.42
BUD5YCR038C TRP5P00931 707 aaKnown RBP6.19□□□□□ -1.42
BUD5YCR038C YNL035CP53962 389 aaKnown RBP6.17□□□□□ -1.42
BUD5YCR038C SEC61P32915 480 aa6.16□□□□□ -1.42
BUD5YCR038C SET4P42948 560 aa6.16□□□□□ -1.42
BUD5YCR038C TFG1P41895 735 aaPredicted RBP6.15□□□□□ -1.42
BUD5YCR038C YOL036WQ08206 761 aa6.13□□□□□ -1.43
BUD5YCR038C YLR271WQ06152 274 aa6.13□□□□□ -1.43
BUD5YCR038C RGA2Q06407 1009 aa6.11□□□□□ -1.43
BUD5YCR038C SAP30P38429 201 aa6.09□□□□□ -1.43
BUD5YCR038C CHL1P22516 861 aaPredicted RBP6.08□□□□□ -1.44
BUD5YCR038C SSP1P38871 571 aa6.07□□□□□ -1.44
BUD5YCR038C PRE3P38624 215 aa6.01□□□□□ -1.45
BUD5YCR038C YDL129WQ07555 291 aa5.99□□□□□ -1.45
BUD5YCR038C XDJ1P39102 459 aa5.97□□□□□ -1.45
BUD5YCR038C PSD2P53037 1138 aaKnown RBP5.97□□□□□ -1.45
BUD5YCR038C MRM1P25270 412 aa5.97□□□□□ -1.45
BUD5YCR038C CST9Q06032 482 aa5.96□□□□□ -1.46
BUD5YCR038C VRP1P37370 817 aa5.95□□□□□ -1.46
BUD5YCR038C AIM44Q99299 758 aa5.95□□□□□ -1.46
BUD5YCR038C DPS1P04802 557 aaKnown RBP5.94□□□□□ -1.46
BUD5YCR038C JIP4Q03361 876 aa5.94□□□□□ -1.46
BUD5YCR038C DAN4P47179 1161 aa5.93□□□□□ -1.46
BUD5YCR038C LEU3P08638 886 aa5.92□□□□□ -1.46
BUD5YCR038C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
BUD5YCR038C VMA1P17255 1071 aaKnown RBP5.91□□□□□ -1.46
BUD5YCR038C DBP1P24784 617 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms