RNA–Protein interactions for RNA: YKL108W

SLD2, Transcript of Single-stranded DNA origin-binding and annealing protein, yeastyeast

Gene SLD2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD2YKL108W DRS1P32892 752 aaKnown RBP13.24□□□□□ -0.29
SLD2YKL108W MTC1P47018 478 aaKnown RBP12.19□□□□□ -0.46
SLD2YKL108W BFR2Q06631 534 aaKnown RBP11.85□□□□□ -0.51
SLD2YKL108W TFA1P36100 482 aa11.72□□□□□ -0.53
SLD2YKL108W FAP1P53971 965 aa11.19□□□□□ -0.62
SLD2YKL108W AVT3P36062 692 aa11.01□□□□□ -0.65
SLD2YKL108W DIP2Q12220 943 aaPredicted RBP10.96□□□□□ -0.65
SLD2YKL108W RQC2Q12532 1038 aaKnown RBP10.87□□□□□ -0.67
SLD2YKL108W PRY3P47033 881 aa10.61□□□□□ -0.71
SLD2YKL108W DMA1P38823 416 aa10.11□□□□□ -0.79
SLD2YKL108W RSE1Q04693 1361 aaKnown RBP10.06□□□□□ -0.8
SLD2YKL108W TAF7Q05021 590 aa10.03□□□□□ -0.8
SLD2YKL108W YCK3P39962 524 aa9.96□□□□□ -0.82
SLD2YKL108W HAA1Q12753 694 aaKnown RBP9.83□□□□□ -0.84
SLD2YKL108W PTP3P40048 928 aa9.76□□□□□ -0.85
SLD2YKL108W ISW2Q08773 1120 aa9.72□□□□□ -0.85
SLD2YKL108W RPL17AP05740 184 aaKnown RBP9.67□□□□□ -0.86
SLD2YKL108W RPL17BP46990 184 aaKnown RBP9.67□□□□□ -0.86
SLD2YKL108W AAD16Q02895 342 aa9.67□□□□□ -0.86
SLD2YKL108W RPG1P38249 964 aaKnown RBP9.63□□□□□ -0.87
SLD2YKL108W LEO1P38439 464 aa9.6□□□□□ -0.87
SLD2YKL108W PRI1P10363 409 aa9.56□□□□□ -0.88
SLD2YKL108W REB1P21538 810 aa9.46□□□□□ -0.9
SLD2YKL108W SSP1P38871 571 aa9.41□□□□□ -0.9
SLD2YKL108W RIM101P33400 625 aa9.4□□□□□ -0.9
SLD2YKL108W SPT21P35209 758 aa9.3□□□□□ -0.92
SLD2YKL108W YAH1Q12184 172 aaKnown RBP9.24□□□□□ -0.93
SLD2YKL108W OXP1P28273 1286 aa9.18□□□□□ -0.94
SLD2YKL108W LEU3P08638 886 aa9.16□□□□□ -0.94
SLD2YKL108W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.15□□□□□ -0.94not detected
SLD2YKL108W SAS10Q12136 610 aaPredicted RBP9.13□□□□□ -0.95
SLD2YKL108W YLR271WQ06152 274 aa9.08□□□□□ -0.96
SLD2YKL108W YIL055CP40523 627 aaKnown RBP9.07□□□□□ -0.96
SLD2YKL108W DMA2P53924 522 aa8.99□□□□□ -0.97
SLD2YKL108W MGA2P40578 1113 aa8.96□□□□□ -0.98
SLD2YKL108W TSR3Q12094 313 aaKnown RBP8.96□□□□□ -0.98
SLD2YKL108W BUD31P25337 157 aaPredicted RBP8.93□□□□□ -0.98
SLD2YKL108W RPN1P38764 993 aaKnown RBP8.89□□□□□ -0.99
SLD2YKL108W RSM7P47150 247 aa8.88□□□□□ -0.99
SLD2YKL108W CST9Q06032 482 aa8.86□□□□□ -0.99
SLD2YKL108W YKR023WP36119 530 aaKnown RBP8.85□□□□□ -0.99
SLD2YKL108W SPB4P25808 606 aaPredicted RBP8.78□□□□□ -1
SLD2YKL108W HOP09932 586 aa8.73□□□□□ -1.01
SLD2YKL108W YGL015CP33199 130 aa8.71□□□□□ -1.02
SLD2YKL108W ABP1P15891 592 aaKnown RBP8.7□□□□□ -1.02
SLD2YKL108W VPS70P47161 811 aa8.68□□□□□ -1.02
SLD2YKL108W PSD2P53037 1138 aaKnown RBP8.68□□□□□ -1.02
SLD2YKL108W RLF2Q12495 606 aa8.68□□□□□ -1.02
SLD2YKL108W AI2P03876 854 aa8.67□□□□□ -1.02
SLD2YKL108W SET1P38827 1080 aaKnown RBP8.67□□□□□ -1.02
SLD2YKL108W DCD1P06773 312 aa8.66□□□□□ -1.02
SLD2YKL108W TFC8Q12308 588 aa8.65□□□□□ -1.02
SLD2YKL108W RAM2P29703 316 aa8.64□□□□□ -1.03
SLD2YKL108W CKB1P43639 278 aa8.63□□□□□ -1.03
SLD2YKL108W MRPL32P25348 183 aa8.61□□□□□ -1.03
SLD2YKL108W YPR148CQ06523 435 aa8.56□□□□□ -1.04
SLD2YKL108W BBC1P47068 1157 aa8.52□□□□□ -1.05
SLD2YKL108W KIN1P13185 1064 aa8.49□□□□□ -1.05
SLD2YKL108W RCR1P38212 213 aa8.48□□□□□ -1.05
SLD2YKL108W IFH1P39520 1085 aa8.48□□□□□ -1.05
SLD2YKL108W MRM1P25270 412 aa8.48□□□□□ -1.05
SLD2YKL108W PBS2P08018 668 aa8.47□□□□□ -1.05
SLD2YKL108W BCH2P36122 765 aa8.47□□□□□ -1.05
SLD2YKL108W CDC27P38042 758 aa8.46□□□□□ -1.06
SLD2YKL108W DSF2P38213 736 aa8.46□□□□□ -1.06
SLD2YKL108W YNR021WP53723 404 aaKnown RBP8.41□□□□□ -1.06
SLD2YKL108W GLC3P32775 704 aa8.39□□□□□ -1.07
SLD2YKL108W RTG3P38165 486 aa8.38□□□□□ -1.07
SLD2YKL108W EPS1P40557 701 aa8.37□□□□□ -1.07
SLD2YKL108W MAK11P20484 414 aaKnown RBP8.36□□□□□ -1.07
SLD2YKL108W HGH1P48362 394 aaKnown RBP8.36□□□□□ -1.07
SLD2YKL108W MAM3Q12296 706 aa8.33□□□□□ -1.08
SLD2YKL108W DIT2P21595 489 aa8.31□□□□□ -1.08
SLD2YKL108W GUA1P38625 525 aaKnown RBP8.31□□□□□ -1.08
SLD2YKL108W IES2P40154 320 aa8.3□□□□□ -1.08
SLD2YKL108W SIS1P25294 352 aaKnown RBP8.29□□□□□ -1.08
SLD2YKL108W COQ8P27697 501 aa8.29□□□□□ -1.08
SLD2YKL108W BDF1P35817 686 aa8.29□□□□□ -1.08
SLD2YKL108W AIM7Q12156 149 aa8.29□□□□□ -1.08
SLD2YKL108W REF2P42073 533 aaPredicted RBP8.25□□□□□ -1.09
SLD2YKL108W NUP42P49686 430 aaKnown RBP8.25□□□□□ -1.09
SLD2YKL108W ATF2P53296 535 aa8.22□□□□□ -1.09
SLD2YKL108W VPS29P38759 282 aa8.22□□□□□ -1.09
SLD2YKL108W MIF2P35201 549 aa8.2□□□□□ -1.1
SLD2YKL108W YML020WQ03722 664 aa8.17□□□□□ -1.1
SLD2YKL108W TFB3Q03290 321 aa8.16□□□□□ -1.1
SLD2YKL108W MAK21Q12176 1025 aaKnown RBP8.16□□□□□ -1.1
SLD2YKL108W SCY1P53009 804 aa8.15□□□□□ -1.1
SLD2YKL108W HPC2Q01448 625 aa8.14□□□□□ -1.11
SLD2YKL108W NOP53Q12080 455 aaKnown RBP8.14□□□□□ -1.11
SLD2YKL108W COX6P00427 148 aa8.13□□□□□ -1.11
SLD2YKL108W EDS1P38073 919 aa8.13□□□□□ -1.11
SLD2YKL108W PKC1P24583 1151 aa8.1□□□□□ -1.11
SLD2YKL108W SLX8P40072 274 aa8.1□□□□□ -1.11
SLD2YKL108W YFR006WP43590 535 aa8.09□□□□□ -1.12
SLD2YKL108W STS1P38637 319 aa8.07□□□□□ -1.12
SLD2YKL108W BRL1P38770 471 aa8.07□□□□□ -1.12
SLD2YKL108W YMR1P47147 688 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
SLD2YKL108W SUB2Q07478 446 aaKnown RBP8.07□□□□□ -1.12
SLD2YKL108W SSA1P10591 642 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 64.2 ms