Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
BLOC1S4Q9NUP1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.49■■□□□ 1.51
BLOC1S4Q9NUP1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
BLOC1S4Q9NUP1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.49■■□□□ 1.51
BLOC1S4Q9NUP1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
BLOC1S4Q9NUP1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
BLOC1S4Q9NUP1 AC137767.1-201ENST00000602918 1920 ntBASIC24.49■■□□□ 1.51
BLOC1S4Q9NUP1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
BLOC1S4Q9NUP1 EP400NL-214ENST00000641289 2402 ntBASIC24.49■■□□□ 1.51
BLOC1S4Q9NUP1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
BLOC1S4Q9NUP1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.48■■□□□ 1.51
BLOC1S4Q9NUP1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
BLOC1S4Q9NUP1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.48■■□□□ 1.51
BLOC1S4Q9NUP1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
BLOC1S4Q9NUP1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC24.48■■□□□ 1.51
BLOC1S4Q9NUP1 AC096631.2-201ENST00000436136 790 ntBASIC24.48■■□□□ 1.51
BLOC1S4Q9NUP1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
BLOC1S4Q9NUP1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.48■■□□□ 1.51
BLOC1S4Q9NUP1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
BLOC1S4Q9NUP1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.48■■□□□ 1.51
BLOC1S4Q9NUP1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
BLOC1S4Q9NUP1 AC139530.1-201ENST00000575312 1977 ntBASIC24.48■■□□□ 1.51
BLOC1S4Q9NUP1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
BLOC1S4Q9NUP1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.48■■□□□ 1.51
BLOC1S4Q9NUP1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
BLOC1S4Q9NUP1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
BLOC1S4Q9NUP1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
BLOC1S4Q9NUP1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
BLOC1S4Q9NUP1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
BLOC1S4Q9NUP1 ECEL1P1-201ENST00000373592 1742 ntBASIC24.47■■□□□ 1.51
BLOC1S4Q9NUP1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
BLOC1S4Q9NUP1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
BLOC1S4Q9NUP1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.47■■□□□ 1.51
BLOC1S4Q9NUP1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.47■■□□□ 1.51
BLOC1S4Q9NUP1 AL136162.1-201ENST00000607711 1078 ntBASIC24.47■■□□□ 1.51
BLOC1S4Q9NUP1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
BLOC1S4Q9NUP1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.47■■□□□ 1.51
BLOC1S4Q9NUP1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
BLOC1S4Q9NUP1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
BLOC1S4Q9NUP1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
BLOC1S4Q9NUP1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
BLOC1S4Q9NUP1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
BLOC1S4Q9NUP1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
BLOC1S4Q9NUP1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
BLOC1S4Q9NUP1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
BLOC1S4Q9NUP1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
BLOC1S4Q9NUP1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
BLOC1S4Q9NUP1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
BLOC1S4Q9NUP1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
BLOC1S4Q9NUP1 SLC47A1P1-202ENST00000449666 945 ntBASIC24.46■■□□□ 1.51
BLOC1S4Q9NUP1 MIR4767-201ENST00000582827 78 ntBASIC24.46■■□□□ 1.51
BLOC1S4Q9NUP1 AC110285.6-201ENST00000617652 491 ntBASIC24.46■■□□□ 1.51
BLOC1S4Q9NUP1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
BLOC1S4Q9NUP1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
BLOC1S4Q9NUP1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
BLOC1S4Q9NUP1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.45■■□□□ 1.51
BLOC1S4Q9NUP1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.45■■□□□ 1.5
BLOC1S4Q9NUP1 AC242852.2-201ENST00000615738 1807 ntBASIC24.45■■□□□ 1.5
BLOC1S4Q9NUP1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
BLOC1S4Q9NUP1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
BLOC1S4Q9NUP1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
BLOC1S4Q9NUP1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.44■■□□□ 1.5
BLOC1S4Q9NUP1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
BLOC1S4Q9NUP1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
BLOC1S4Q9NUP1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
BLOC1S4Q9NUP1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
BLOC1S4Q9NUP1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.44■■□□□ 1.5
BLOC1S4Q9NUP1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
BLOC1S4Q9NUP1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
BLOC1S4Q9NUP1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
BLOC1S4Q9NUP1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
BLOC1S4Q9NUP1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
BLOC1S4Q9NUP1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
BLOC1S4Q9NUP1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
BLOC1S4Q9NUP1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.43■■□□□ 1.5
BLOC1S4Q9NUP1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
BLOC1S4Q9NUP1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.43■■□□□ 1.5
BLOC1S4Q9NUP1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
BLOC1S4Q9NUP1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.43■■□□□ 1.5
BLOC1S4Q9NUP1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
BLOC1S4Q9NUP1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
BLOC1S4Q9NUP1 AC135279.3-201ENST00000610945 1311 ntBASIC24.42■■□□□ 1.5
BLOC1S4Q9NUP1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
BLOC1S4Q9NUP1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
BLOC1S4Q9NUP1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24.42■■□□□ 1.5
BLOC1S4Q9NUP1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.42■■□□□ 1.5
BLOC1S4Q9NUP1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.42■■□□□ 1.5
BLOC1S4Q9NUP1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.42■■□□□ 1.5
BLOC1S4Q9NUP1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
BLOC1S4Q9NUP1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
BLOC1S4Q9NUP1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
BLOC1S4Q9NUP1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
BLOC1S4Q9NUP1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
BLOC1S4Q9NUP1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.41■■□□□ 1.5
BLOC1S4Q9NUP1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
BLOC1S4Q9NUP1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
BLOC1S4Q9NUP1 LINC00526-201ENST00000581067 1875 ntBASIC24.41■■□□□ 1.5
BLOC1S4Q9NUP1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.41■■□□□ 1.5
BLOC1S4Q9NUP1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.41■■□□□ 1.5
BLOC1S4Q9NUP1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms