Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRCC1Q9NPI7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
KRCC1Q9NPI7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRCC1Q9NPI7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRCC1Q9NPI7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
KRCC1Q9NPI7 LINC01960-201ENST00000563759 1884 ntBASIC20.07■□□□□ 0.8
KRCC1Q9NPI7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRCC1Q9NPI7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
KRCC1Q9NPI7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
KRCC1Q9NPI7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRCC1Q9NPI7 AC080038.3-201ENST00000623346 1952 ntBASIC20.06■□□□□ 0.8
KRCC1Q9NPI7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRCC1Q9NPI7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
KRCC1Q9NPI7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
KRCC1Q9NPI7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRCC1Q9NPI7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
KRCC1Q9NPI7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRCC1Q9NPI7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRCC1Q9NPI7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.06■□□□□ 0.8
KRCC1Q9NPI7 KRT125P-201ENST00000546827 989 ntBASIC20.06■□□□□ 0.8
KRCC1Q9NPI7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.06■□□□□ 0.8
KRCC1Q9NPI7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.06■□□□□ 0.8
KRCC1Q9NPI7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.06■□□□□ 0.8
KRCC1Q9NPI7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.06■□□□□ 0.8
KRCC1Q9NPI7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
KRCC1Q9NPI7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRCC1Q9NPI7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRCC1Q9NPI7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KRCC1Q9NPI7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.05■□□□□ 0.8
KRCC1Q9NPI7 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.05■□□□□ 0.8
KRCC1Q9NPI7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRCC1Q9NPI7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRCC1Q9NPI7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.05■□□□□ 0.8
KRCC1Q9NPI7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.05■□□□□ 0.8
KRCC1Q9NPI7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRCC1Q9NPI7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.05■□□□□ 0.8
KRCC1Q9NPI7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRCC1Q9NPI7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.05■□□□□ 0.8
KRCC1Q9NPI7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
KRCC1Q9NPI7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.05■□□□□ 0.8
KRCC1Q9NPI7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRCC1Q9NPI7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRCC1Q9NPI7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRCC1Q9NPI7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
KRCC1Q9NPI7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRCC1Q9NPI7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.04■□□□□ 0.8
KRCC1Q9NPI7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.04■□□□□ 0.8
KRCC1Q9NPI7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRCC1Q9NPI7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRCC1Q9NPI7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRCC1Q9NPI7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
KRCC1Q9NPI7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.04■□□□□ 0.8
KRCC1Q9NPI7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
KRCC1Q9NPI7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.03■□□□□ 0.8
KRCC1Q9NPI7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
KRCC1Q9NPI7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRCC1Q9NPI7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRCC1Q9NPI7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.03■□□□□ 0.8
KRCC1Q9NPI7 MTDHP2-201ENST00000601468 714 ntBASIC20.03■□□□□ 0.8
KRCC1Q9NPI7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRCC1Q9NPI7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.03■□□□□ 0.8
KRCC1Q9NPI7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRCC1Q9NPI7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.03■□□□□ 0.8
KRCC1Q9NPI7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRCC1Q9NPI7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
KRCC1Q9NPI7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRCC1Q9NPI7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRCC1Q9NPI7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRCC1Q9NPI7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.02■□□□□ 0.8
KRCC1Q9NPI7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRCC1Q9NPI7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRCC1Q9NPI7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRCC1Q9NPI7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRCC1Q9NPI7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRCC1Q9NPI7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
KRCC1Q9NPI7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRCC1Q9NPI7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
KRCC1Q9NPI7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.02■□□□□ 0.8
KRCC1Q9NPI7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
KRCC1Q9NPI7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.02■□□□□ 0.79
KRCC1Q9NPI7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.01■□□□□ 0.79
KRCC1Q9NPI7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.01■□□□□ 0.79
KRCC1Q9NPI7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.01■□□□□ 0.79
KRCC1Q9NPI7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRCC1Q9NPI7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
KRCC1Q9NPI7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.01■□□□□ 0.79
KRCC1Q9NPI7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.01■□□□□ 0.79
KRCC1Q9NPI7 AC092028.1-203ENST00000608262 953 ntBASIC20.01■□□□□ 0.79
KRCC1Q9NPI7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRCC1Q9NPI7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.01■□□□□ 0.79
KRCC1Q9NPI7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.01■□□□□ 0.79
KRCC1Q9NPI7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRCC1Q9NPI7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRCC1Q9NPI7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRCC1Q9NPI7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRCC1Q9NPI7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
KRCC1Q9NPI7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
KRCC1Q9NPI7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
KRCC1Q9NPI7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRCC1Q9NPI7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms