Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.15■□□□□ 0.82
RPS4Y1P22090 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RPS4Y1P22090 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4Y1P22090 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.15■□□□□ 0.82
RPS4Y1P22090 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.15■□□□□ 0.82
RPS4Y1P22090 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4Y1P22090 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.15■□□□□ 0.82
RPS4Y1P22090 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.15■□□□□ 0.82
RPS4Y1P22090 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4Y1P22090 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4Y1P22090 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4Y1P22090 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.14■□□□□ 0.81
RPS4Y1P22090 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.14■□□□□ 0.81
RPS4Y1P22090 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
RPS4Y1P22090 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y1P22090 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y1P22090 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RPS4Y1P22090 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.14■□□□□ 0.81
RPS4Y1P22090 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y1P22090 C11orf96-202ENST00000528572 1834 ntBASIC20.14■□□□□ 0.81
RPS4Y1P22090 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y1P22090 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
RPS4Y1P22090 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y1P22090 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y1P22090 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.14■□□□□ 0.81
RPS4Y1P22090 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.14■□□□□ 0.81
RPS4Y1P22090 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.14■□□□□ 0.81
RPS4Y1P22090 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RPS4Y1P22090 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y1P22090 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y1P22090 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y1P22090 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y1P22090 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4Y1P22090 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.13■□□□□ 0.81
RPS4Y1P22090 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.13■□□□□ 0.81
RPS4Y1P22090 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4Y1P22090 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RPS4Y1P22090 MIR4466-201ENST00000606121 54 ntBASIC20.13■□□□□ 0.81
RPS4Y1P22090 AC092171.4-201ENST00000609130 632 ntBASIC20.13■□□□□ 0.81
RPS4Y1P22090 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.13■□□□□ 0.81
RPS4Y1P22090 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4Y1P22090 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4Y1P22090 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RPS4Y1P22090 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4Y1P22090 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4Y1P22090 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPS4Y1P22090 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
RPS4Y1P22090 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.12■□□□□ 0.81
RPS4Y1P22090 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPS4Y1P22090 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RPS4Y1P22090 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.12■□□□□ 0.81
RPS4Y1P22090 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPS4Y1P22090 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPS4Y1P22090 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPS4Y1P22090 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.12■□□□□ 0.81
RPS4Y1P22090 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.12■□□□□ 0.81
RPS4Y1P22090 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.12■□□□□ 0.81
RPS4Y1P22090 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPS4Y1P22090 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
RPS4Y1P22090 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RPS4Y1P22090 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.11■□□□□ 0.81
RPS4Y1P22090 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4Y1P22090 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4Y1P22090 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.11■□□□□ 0.81
RPS4Y1P22090 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4Y1P22090 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.11■□□□□ 0.81
RPS4Y1P22090 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.11■□□□□ 0.81
RPS4Y1P22090 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4Y1P22090 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4Y1P22090 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.11■□□□□ 0.81
RPS4Y1P22090 OR2I1P-207ENST00000453522 948 ntBASIC20.11■□□□□ 0.81
RPS4Y1P22090 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.11■□□□□ 0.81
RPS4Y1P22090 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.11■□□□□ 0.81
RPS4Y1P22090 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RPS4Y1P22090 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4Y1P22090 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.11■□□□□ 0.81
RPS4Y1P22090 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.11■□□□□ 0.81
RPS4Y1P22090 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.11■□□□□ 0.81
RPS4Y1P22090 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4Y1P22090 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4Y1P22090 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
RPS4Y1P22090 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.1■□□□□ 0.81
RPS4Y1P22090 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4Y1P22090 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4Y1P22090 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4Y1P22090 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RPS4Y1P22090 AC131281.2-201ENST00000520478 145 ntBASIC20.1■□□□□ 0.81
RPS4Y1P22090 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.1■□□□□ 0.81
RPS4Y1P22090 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
RPS4Y1P22090 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4Y1P22090 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4Y1P22090 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4Y1P22090 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RPS4Y1P22090 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4Y1P22090 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4Y1P22090 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4Y1P22090 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.09■□□□□ 0.81
RPS4Y1P22090 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.09■□□□□ 0.81
RPS4Y1P22090 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
RPS4Y1P22090 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms