Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPK1BO75841 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPK1BO75841 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.13■□□□□ 0.65
UPK1BO75841 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPK1BO75841 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
UPK1BO75841 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPK1BO75841 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPK1BO75841 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.12■□□□□ 0.65
UPK1BO75841 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
UPK1BO75841 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.12■□□□□ 0.65
UPK1BO75841 ALDH1A3-203ENST00000557963 1670 ntBASIC19.12■□□□□ 0.65
UPK1BO75841 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPK1BO75841 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.12■□□□□ 0.65
UPK1BO75841 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.12■□□□□ 0.65
UPK1BO75841 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPK1BO75841 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPK1BO75841 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
UPK1BO75841 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.12■□□□□ 0.65
UPK1BO75841 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPK1BO75841 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UPK1BO75841 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.11■□□□□ 0.65
UPK1BO75841 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPK1BO75841 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UPK1BO75841 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UPK1BO75841 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.11■□□□□ 0.65
UPK1BO75841 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPK1BO75841 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
UPK1BO75841 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPK1BO75841 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
UPK1BO75841 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.11■□□□□ 0.65
UPK1BO75841 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.11■□□□□ 0.65
UPK1BO75841 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPK1BO75841 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.11■□□□□ 0.65
UPK1BO75841 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPK1BO75841 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPK1BO75841 FEM1AP1-201ENST00000431297 1995 ntBASIC19.11■□□□□ 0.65
UPK1BO75841 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UPK1BO75841 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UPK1BO75841 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPK1BO75841 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.11■□□□□ 0.65
UPK1BO75841 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPK1BO75841 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPK1BO75841 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
UPK1BO75841 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPK1BO75841 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UPK1BO75841 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPK1BO75841 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPK1BO75841 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
UPK1BO75841 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.1■□□□□ 0.65
UPK1BO75841 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPK1BO75841 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.1■□□□□ 0.65
UPK1BO75841 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
UPK1BO75841 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.1■□□□□ 0.65
UPK1BO75841 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.1■□□□□ 0.65
UPK1BO75841 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.1■□□□□ 0.65
UPK1BO75841 MIR3665-201ENST00000578708 105 ntBASIC19.1■□□□□ 0.65
UPK1BO75841 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UPK1BO75841 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.1■□□□□ 0.65
UPK1BO75841 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPK1BO75841 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.1■□□□□ 0.65
UPK1BO75841 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPK1BO75841 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPK1BO75841 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UPK1BO75841 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.09■□□□□ 0.65
UPK1BO75841 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
UPK1BO75841 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPK1BO75841 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.09■□□□□ 0.65
UPK1BO75841 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPK1BO75841 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPK1BO75841 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
UPK1BO75841 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
UPK1BO75841 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.09■□□□□ 0.65
UPK1BO75841 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPK1BO75841 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPK1BO75841 AL353803.4-201ENST00000565882 1934 ntBASIC19.09■□□□□ 0.65
UPK1BO75841 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPK1BO75841 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPK1BO75841 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
UPK1BO75841 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPK1BO75841 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPK1BO75841 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPK1BO75841 AL022069.1-201ENST00000568025 1636 ntBASIC19.08■□□□□ 0.65
UPK1BO75841 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UPK1BO75841 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.08■□□□□ 0.65
UPK1BO75841 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
UPK1BO75841 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPK1BO75841 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPK1BO75841 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPK1BO75841 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPK1BO75841 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UPK1BO75841 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
UPK1BO75841 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.08■□□□□ 0.64
UPK1BO75841 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1BO75841 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
UPK1BO75841 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.07■□□□□ 0.64
UPK1BO75841 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1BO75841 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1BO75841 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.07■□□□□ 0.64
UPK1BO75841 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1BO75841 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms