Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
CTNSO60931 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTNSO60931 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTNSO60931 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTNSO60931 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.57■□□□□ 0.88
CTNSO60931 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.57■□□□□ 0.88
CTNSO60931 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CTNSO60931 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTNSO60931 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTNSO60931 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.57■□□□□ 0.88
CTNSO60931 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.56■□□□□ 0.88
CTNSO60931 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CTNSO60931 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTNSO60931 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CTNSO60931 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNSO60931 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNSO60931 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.56■□□□□ 0.88
CTNSO60931 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNSO60931 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNSO60931 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.56■□□□□ 0.88
CTNSO60931 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTNSO60931 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.56■□□□□ 0.88
CTNSO60931 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CTNSO60931 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CTNSO60931 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTNSO60931 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CTNSO60931 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNSO60931 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNSO60931 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.55■□□□□ 0.88
CTNSO60931 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTNSO60931 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTNSO60931 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTNSO60931 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.55■□□□□ 0.88
CTNSO60931 AC087239.1-201ENST00000622671 572 ntBASIC20.55■□□□□ 0.88
CTNSO60931 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CTNSO60931 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNSO60931 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.55■□□□□ 0.88
CTNSO60931 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTNSO60931 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTNSO60931 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNSO60931 ESRRAP2-201ENST00000418437 1549 ntBASIC20.54■□□□□ 0.88
CTNSO60931 AC068473.5-201ENST00000616428 2072 ntBASIC20.54■□□□□ 0.88
CTNSO60931 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNSO60931 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.54■□□□□ 0.88
CTNSO60931 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNSO60931 C1orf229-201ENST00000623686 2258 ntBASIC20.54■□□□□ 0.88
CTNSO60931 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNSO60931 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNSO60931 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.54■□□□□ 0.88
CTNSO60931 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.54■□□□□ 0.88
CTNSO60931 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.54■□□□□ 0.88
CTNSO60931 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTNSO60931 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTNSO60931 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNSO60931 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNSO60931 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.54■□□□□ 0.88
CTNSO60931 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNSO60931 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTNSO60931 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTNSO60931 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CTNSO60931 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTNSO60931 AC010141.3-201ENST00000456659 717 ntBASIC20.53■□□□□ 0.88
CTNSO60931 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CTNSO60931 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CTNSO60931 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTNSO60931 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTNSO60931 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CTNSO60931 AC087742.1-201ENST00000575880 1738 ntBASIC20.53■□□□□ 0.88
CTNSO60931 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CTNSO60931 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CTNSO60931 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTNSO60931 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.52■□□□□ 0.88
CTNSO60931 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.52■□□□□ 0.88
CTNSO60931 IGHV3-19-201ENST00000521488 291 ntBASIC20.52■□□□□ 0.88
CTNSO60931 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTNSO60931 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.52■□□□□ 0.88
CTNSO60931 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTNSO60931 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.52■□□□□ 0.87
CTNSO60931 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CTNSO60931 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNSO60931 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CTNSO60931 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CTNSO60931 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNSO60931 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CTNSO60931 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.51■□□□□ 0.87
CTNSO60931 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTNSO60931 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.51■□□□□ 0.87
CTNSO60931 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNSO60931 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNSO60931 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.51■□□□□ 0.87
CTNSO60931 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTNSO60931 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
CTNSO60931 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTNSO60931 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTNSO60931 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.5■□□□□ 0.87
CTNSO60931 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.5■□□□□ 0.87
CTNSO60931 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.5■□□□□ 0.87
CTNSO60931 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CTNSO60931 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTNSO60931 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms