Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSNK1G3Q9Y6M4 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.56■■□□□ 1.04
CSNK1G3Q9Y6M4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.56■■□□□ 1.04
CSNK1G3Q9Y6M4 AC090192.1-201ENST00000517740 490 ntBASIC21.56■■□□□ 1.04
CSNK1G3Q9Y6M4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
CSNK1G3Q9Y6M4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.56■■□□□ 1.04
CSNK1G3Q9Y6M4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CSNK1G3Q9Y6M4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CSNK1G3Q9Y6M4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSNK1G3Q9Y6M4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSNK1G3Q9Y6M4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSNK1G3Q9Y6M4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSNK1G3Q9Y6M4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1G3Q9Y6M4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1G3Q9Y6M4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1G3Q9Y6M4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CSNK1G3Q9Y6M4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1G3Q9Y6M4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.55■■□□□ 1.04
CSNK1G3Q9Y6M4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1G3Q9Y6M4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1G3Q9Y6M4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CSNK1G3Q9Y6M4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.55■■□□□ 1.04
CSNK1G3Q9Y6M4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1G3Q9Y6M4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1G3Q9Y6M4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1G3Q9Y6M4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1G3Q9Y6M4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1G3Q9Y6M4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.55■■□□□ 1.04
CSNK1G3Q9Y6M4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1G3Q9Y6M4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSNK1G3Q9Y6M4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSNK1G3Q9Y6M4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CSNK1G3Q9Y6M4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CSNK1G3Q9Y6M4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSNK1G3Q9Y6M4 AC079630.1-202ENST00000618127 1840 ntBASIC21.54■■□□□ 1.04
CSNK1G3Q9Y6M4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSNK1G3Q9Y6M4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
CSNK1G3Q9Y6M4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CSNK1G3Q9Y6M4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.53■■□□□ 1.04
CSNK1G3Q9Y6M4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CSNK1G3Q9Y6M4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSNK1G3Q9Y6M4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CSNK1G3Q9Y6M4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CSNK1G3Q9Y6M4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
CSNK1G3Q9Y6M4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSNK1G3Q9Y6M4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.53■■□□□ 1.04
CSNK1G3Q9Y6M4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSNK1G3Q9Y6M4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.53■■□□□ 1.04
CSNK1G3Q9Y6M4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSNK1G3Q9Y6M4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.53■■□□□ 1.04
CSNK1G3Q9Y6M4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.53■■□□□ 1.04
CSNK1G3Q9Y6M4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CSNK1G3Q9Y6M4 LINC01124-201ENST00000409786 2117 ntBASIC21.52■■□□□ 1.04
CSNK1G3Q9Y6M4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.52■■□□□ 1.04
CSNK1G3Q9Y6M4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.52■■□□□ 1.04
CSNK1G3Q9Y6M4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.52■■□□□ 1.04
CSNK1G3Q9Y6M4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CSNK1G3Q9Y6M4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.52■■□□□ 1.04
CSNK1G3Q9Y6M4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CSNK1G3Q9Y6M4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CSNK1G3Q9Y6M4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CSNK1G3Q9Y6M4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.52■■□□□ 1.04
CSNK1G3Q9Y6M4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.52■■□□□ 1.04
CSNK1G3Q9Y6M4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CSNK1G3Q9Y6M4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CSNK1G3Q9Y6M4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.51■■□□□ 1.03
CSNK1G3Q9Y6M4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CSNK1G3Q9Y6M4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CSNK1G3Q9Y6M4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CSNK1G3Q9Y6M4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CSNK1G3Q9Y6M4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CSNK1G3Q9Y6M4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.51■■□□□ 1.03
CSNK1G3Q9Y6M4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.51■■□□□ 1.03
CSNK1G3Q9Y6M4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CSNK1G3Q9Y6M4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.51■■□□□ 1.03
CSNK1G3Q9Y6M4 AC087239.1-201ENST00000622671 572 ntBASIC21.51■■□□□ 1.03
CSNK1G3Q9Y6M4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CSNK1G3Q9Y6M4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.51■■□□□ 1.03
CSNK1G3Q9Y6M4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CSNK1G3Q9Y6M4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CSNK1G3Q9Y6M4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CSNK1G3Q9Y6M4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 AC004687.1-201ENST00000579003 1625 ntBASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms