Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
CCDC71LQ8N9Z2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC71LQ8N9Z2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71LQ8N9Z2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC71LQ8N9Z2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71LQ8N9Z2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC71LQ8N9Z2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71LQ8N9Z2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC71LQ8N9Z2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71LQ8N9Z2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71LQ8N9Z2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71LQ8N9Z2 AC144652.1-201ENST00000609974 1624 ntBASIC18.26■□□□□ 0.51
CCDC71LQ8N9Z2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC71LQ8N9Z2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71LQ8N9Z2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71LQ8N9Z2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71LQ8N9Z2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71LQ8N9Z2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC71LQ8N9Z2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71LQ8N9Z2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71LQ8N9Z2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC71LQ8N9Z2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71LQ8N9Z2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC71LQ8N9Z2 AC139795.1-202ENST00000500444 432 ntBASIC18.25■□□□□ 0.51
CCDC71LQ8N9Z2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC71LQ8N9Z2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71LQ8N9Z2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC71LQ8N9Z2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC71LQ8N9Z2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC71LQ8N9Z2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71LQ8N9Z2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71LQ8N9Z2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71LQ8N9Z2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
CCDC71LQ8N9Z2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71LQ8N9Z2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71LQ8N9Z2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71LQ8N9Z2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71LQ8N9Z2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71LQ8N9Z2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCDC71LQ8N9Z2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC71LQ8N9Z2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71LQ8N9Z2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71LQ8N9Z2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71LQ8N9Z2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC71LQ8N9Z2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC71LQ8N9Z2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC71LQ8N9Z2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC71LQ8N9Z2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC71LQ8N9Z2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
CCDC71LQ8N9Z2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC71LQ8N9Z2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC71LQ8N9Z2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC71LQ8N9Z2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC71LQ8N9Z2 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.23■□□□□ 0.51
CCDC71LQ8N9Z2 AC120024.1-201ENST00000562672 995 ntBASIC18.23■□□□□ 0.51
CCDC71LQ8N9Z2 AC129492.7-201ENST00000622992 756 ntBASIC18.23■□□□□ 0.51
CCDC71LQ8N9Z2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC71LQ8N9Z2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC71LQ8N9Z2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC71LQ8N9Z2 AF131216.4-201ENST00000638924 1588 ntBASIC18.22■□□□□ 0.51
CCDC71LQ8N9Z2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC71LQ8N9Z2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CCDC71LQ8N9Z2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC71LQ8N9Z2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC71LQ8N9Z2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC71LQ8N9Z2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC71LQ8N9Z2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC71LQ8N9Z2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC71LQ8N9Z2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC71LQ8N9Z2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC71LQ8N9Z2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71LQ8N9Z2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71LQ8N9Z2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC71LQ8N9Z2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC71LQ8N9Z2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC71LQ8N9Z2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC71LQ8N9Z2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC71LQ8N9Z2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71LQ8N9Z2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71LQ8N9Z2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71LQ8N9Z2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71LQ8N9Z2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71LQ8N9Z2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71LQ8N9Z2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71LQ8N9Z2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71LQ8N9Z2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71LQ8N9Z2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC71LQ8N9Z2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
CCDC71LQ8N9Z2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC71LQ8N9Z2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CCDC71LQ8N9Z2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71LQ8N9Z2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCDC71LQ8N9Z2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71LQ8N9Z2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71LQ8N9Z2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
CCDC71LQ8N9Z2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71LQ8N9Z2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC71LQ8N9Z2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71LQ8N9Z2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC71LQ8N9Z2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms