Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KRT78Q8N1N4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT78Q8N1N4 SYT6-210ENST00000641643 1587 ntBASIC21.19■□□□□ 0.98
KRT78Q8N1N4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KRT78Q8N1N4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT78Q8N1N4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT78Q8N1N4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT78Q8N1N4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT78Q8N1N4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT78Q8N1N4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.18■□□□□ 0.98
KRT78Q8N1N4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT78Q8N1N4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
KRT78Q8N1N4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT78Q8N1N4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT78Q8N1N4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT78Q8N1N4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.18■□□□□ 0.98
KRT78Q8N1N4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
KRT78Q8N1N4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT78Q8N1N4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
KRT78Q8N1N4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT78Q8N1N4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT78Q8N1N4 AL138724.1-201ENST00000606771 1088 ntBASIC21.17■□□□□ 0.98
KRT78Q8N1N4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT78Q8N1N4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
KRT78Q8N1N4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT78Q8N1N4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT78Q8N1N4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
KRT78Q8N1N4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
KRT78Q8N1N4 AC233723.2-201ENST00000623798 2106 ntBASIC21.17■□□□□ 0.98
KRT78Q8N1N4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
KRT78Q8N1N4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
KRT78Q8N1N4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.16■□□□□ 0.98
KRT78Q8N1N4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
KRT78Q8N1N4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KRT78Q8N1N4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT78Q8N1N4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT78Q8N1N4 AC008406.3-201ENST00000620001 1374 ntBASIC21.16■□□□□ 0.98
KRT78Q8N1N4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
KRT78Q8N1N4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KRT78Q8N1N4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.16■□□□□ 0.98
KRT78Q8N1N4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.16■□□□□ 0.98
KRT78Q8N1N4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT78Q8N1N4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
KRT78Q8N1N4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
KRT78Q8N1N4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
KRT78Q8N1N4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KRT78Q8N1N4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT78Q8N1N4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
KRT78Q8N1N4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT78Q8N1N4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.15■□□□□ 0.98
KRT78Q8N1N4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT78Q8N1N4 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.15■□□□□ 0.98
KRT78Q8N1N4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
KRT78Q8N1N4 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT78Q8N1N4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT78Q8N1N4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRT78Q8N1N4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT78Q8N1N4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRT78Q8N1N4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
KRT78Q8N1N4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
KRT78Q8N1N4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRT78Q8N1N4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.14■□□□□ 0.98
KRT78Q8N1N4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.14■□□□□ 0.98
KRT78Q8N1N4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRT78Q8N1N4 LINC01960-201ENST00000563759 1884 ntBASIC21.14■□□□□ 0.97
KRT78Q8N1N4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT78Q8N1N4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT78Q8N1N4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRT78Q8N1N4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.14■□□□□ 0.97
KRT78Q8N1N4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
KRT78Q8N1N4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT78Q8N1N4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT78Q8N1N4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT78Q8N1N4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT78Q8N1N4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
KRT78Q8N1N4 SERBP1P1-201ENST00000396021 1160 ntBASIC21.13■□□□□ 0.97
KRT78Q8N1N4 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.13■□□□□ 0.97
KRT78Q8N1N4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.13■□□□□ 0.97
KRT78Q8N1N4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.13■□□□□ 0.97
KRT78Q8N1N4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT78Q8N1N4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT78Q8N1N4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRT78Q8N1N4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
KRT78Q8N1N4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT78Q8N1N4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT78Q8N1N4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
KRT78Q8N1N4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KRT78Q8N1N4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.12■□□□□ 0.97
KRT78Q8N1N4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.12■□□□□ 0.97
KRT78Q8N1N4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.12■□□□□ 0.97
KRT78Q8N1N4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.12■□□□□ 0.97
KRT78Q8N1N4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRT78Q8N1N4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.11■□□□□ 0.97
KRT78Q8N1N4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.11■□□□□ 0.97
KRT78Q8N1N4 AC127496.7-201ENST00000625110 1798 ntBASIC21.11■□□□□ 0.97
KRT78Q8N1N4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT78Q8N1N4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT78Q8N1N4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
KRT78Q8N1N4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT78Q8N1N4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms