Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTTNQ86VV8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTTNQ86VV8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
RTTNQ86VV8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.32■□□□□ 0.68
RTTNQ86VV8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTTNQ86VV8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.32■□□□□ 0.68
RTTNQ86VV8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RTTNQ86VV8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.31■□□□□ 0.68
RTTNQ86VV8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTTNQ86VV8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTTNQ86VV8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RTTNQ86VV8 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.31■□□□□ 0.68
RTTNQ86VV8 MIR6821-201ENST00000617625 74 ntBASIC19.31■□□□□ 0.68
RTTNQ86VV8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.31■□□□□ 0.68
RTTNQ86VV8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTTNQ86VV8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTTNQ86VV8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTTNQ86VV8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTTNQ86VV8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.31■□□□□ 0.68
RTTNQ86VV8 SERBP1P1-201ENST00000396021 1160 ntBASIC19.31■□□□□ 0.68
RTTNQ86VV8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RTTNQ86VV8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTTNQ86VV8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.3■□□□□ 0.68
RTTNQ86VV8 SYT6-210ENST00000641643 1587 ntBASIC19.3■□□□□ 0.68
RTTNQ86VV8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTTNQ86VV8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.3■□□□□ 0.68
RTTNQ86VV8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
RTTNQ86VV8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.3■□□□□ 0.68
RTTNQ86VV8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTTNQ86VV8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.3■□□□□ 0.68
RTTNQ86VV8 ESRRAP2-201ENST00000418437 1549 ntBASIC19.3■□□□□ 0.68
RTTNQ86VV8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTTNQ86VV8 AC233723.2-201ENST00000623798 2106 ntBASIC19.3■□□□□ 0.68
RTTNQ86VV8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTTNQ86VV8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.29■□□□□ 0.68
RTTNQ86VV8 AC241377.3-202ENST00000626088 1088 ntBASIC19.29■□□□□ 0.68
RTTNQ86VV8 AC241585.3-202ENST00000628937 1088 ntBASIC19.29■□□□□ 0.68
RTTNQ86VV8 AC245100.8-202ENST00000629247 1058 ntBASIC19.29■□□□□ 0.68
RTTNQ86VV8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.29■□□□□ 0.68
RTTNQ86VV8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.29■□□□□ 0.68
RTTNQ86VV8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RTTNQ86VV8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTTNQ86VV8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTTNQ86VV8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTTNQ86VV8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTTNQ86VV8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTTNQ86VV8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RTTNQ86VV8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.29■□□□□ 0.68
RTTNQ86VV8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.29■□□□□ 0.68
RTTNQ86VV8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RTTNQ86VV8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.29■□□□□ 0.68
RTTNQ86VV8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.29■□□□□ 0.68
RTTNQ86VV8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTTNQ86VV8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTTNQ86VV8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.28■□□□□ 0.68
RTTNQ86VV8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RTTNQ86VV8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTTNQ86VV8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTTNQ86VV8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.28■□□□□ 0.68
RTTNQ86VV8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTTNQ86VV8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RTTNQ86VV8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.28■□□□□ 0.68
RTTNQ86VV8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RTTNQ86VV8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTTNQ86VV8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTTNQ86VV8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTTNQ86VV8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTTNQ86VV8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTTNQ86VV8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.27■□□□□ 0.68
RTTNQ86VV8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTTNQ86VV8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.27■□□□□ 0.68
RTTNQ86VV8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.27■□□□□ 0.68
RTTNQ86VV8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.27■□□□□ 0.68
RTTNQ86VV8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTTNQ86VV8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTTNQ86VV8 AC004687.1-201ENST00000579003 1625 ntBASIC19.27■□□□□ 0.67
RTTNQ86VV8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RTTNQ86VV8 AC105265.2-201ENST00000467189 838 ntBASIC19.27■□□□□ 0.67
RTTNQ86VV8 AC024257.2-201ENST00000549699 147 ntBASIC19.27■□□□□ 0.67
RTTNQ86VV8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.27■□□□□ 0.67
RTTNQ86VV8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.26■□□□□ 0.67
RTTNQ86VV8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTTNQ86VV8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTTNQ86VV8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTTNQ86VV8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTTNQ86VV8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.26■□□□□ 0.67
RTTNQ86VV8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.26■□□□□ 0.67
RTTNQ86VV8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.26■□□□□ 0.67
RTTNQ86VV8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTTNQ86VV8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RTTNQ86VV8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
RTTNQ86VV8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RTTNQ86VV8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTTNQ86VV8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTTNQ86VV8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTTNQ86VV8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTTNQ86VV8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTTNQ86VV8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTTNQ86VV8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTTNQ86VV8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms