Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 GXYLT1P5-201ENST00000614548 1189 ntBASIC33.83■■■■□ 3.01
CDC42BPAQ5VT25 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
CDC42BPAQ5VT25 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC33.82■■■■□ 3.01
CDC42BPAQ5VT25 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
CDC42BPAQ5VT25 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC33.82■■■■□ 3
CDC42BPAQ5VT25 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC33.82■■■■□ 3
CDC42BPAQ5VT25 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC33.82■■■■□ 3
CDC42BPAQ5VT25 AC068587.7-201ENST00000641602 218 ntBASIC33.82■■■■□ 3
CDC42BPAQ5VT25 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC33.82■■■■□ 3
CDC42BPAQ5VT25 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC33.82■■■■□ 3
CDC42BPAQ5VT25 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC33.82■■■■□ 3
CDC42BPAQ5VT25 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
CDC42BPAQ5VT25 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
CDC42BPAQ5VT25 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
CDC42BPAQ5VT25 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
CDC42BPAQ5VT25 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC33.81■■■■□ 3
CDC42BPAQ5VT25 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC33.81■■■■□ 3
CDC42BPAQ5VT25 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC33.81■■■■□ 3
CDC42BPAQ5VT25 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC33.81■■■■□ 3
CDC42BPAQ5VT25 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC33.8■■■■□ 3
CDC42BPAQ5VT25 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC33.8■■■■□ 3
CDC42BPAQ5VT25 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC33.8■■■■□ 3
CDC42BPAQ5VT25 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
CDC42BPAQ5VT25 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC33.8■■■■□ 3
CDC42BPAQ5VT25 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC33.8■■■■□ 3
CDC42BPAQ5VT25 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC33.8■■■■□ 3
CDC42BPAQ5VT25 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC33.8■■■■□ 3
CDC42BPAQ5VT25 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC33.8■■■■□ 3
CDC42BPAQ5VT25 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC33.8■■■■□ 3
CDC42BPAQ5VT25 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC33.8■■■■□ 3
CDC42BPAQ5VT25 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC33.8■■■■□ 3
CDC42BPAQ5VT25 H19-210ENST00000439725 1929 ntTSL 2 BASIC33.79■■■■□ 3
CDC42BPAQ5VT25 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
CDC42BPAQ5VT25 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
CDC42BPAQ5VT25 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC33.79■■■■□ 3
CDC42BPAQ5VT25 BID-214ENST00000617586 542 ntTSL 5 BASIC33.79■■■■□ 3
CDC42BPAQ5VT25 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC33.79■■■■□ 3
CDC42BPAQ5VT25 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC33.79■■■■□ 3
CDC42BPAQ5VT25 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
CDC42BPAQ5VT25 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC33.79■■■■□ 3
CDC42BPAQ5VT25 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC33.79■■■■□ 3
CDC42BPAQ5VT25 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC33.79■■■■□ 3
CDC42BPAQ5VT25 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC33.79■■■■□ 3
CDC42BPAQ5VT25 PPP1R14BP3-201ENST00000509033 445 ntBASIC33.79■■■■□ 3
CDC42BPAQ5VT25 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC33.79■■■■□ 3
CDC42BPAQ5VT25 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC33.79■■■■□ 3
CDC42BPAQ5VT25 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC33.79■■■■□ 3
CDC42BPAQ5VT25 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC33.78■■■■□ 3
CDC42BPAQ5VT25 LINC00543-201ENST00000567234 1845 ntBASIC33.78■■■■□ 3
CDC42BPAQ5VT25 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC33.78■■■■□ 3
CDC42BPAQ5VT25 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
CDC42BPAQ5VT25 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC33.78■■■■□ 3
CDC42BPAQ5VT25 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
CDC42BPAQ5VT25 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
CDC42BPAQ5VT25 AC087239.1-201ENST00000622671 572 ntBASIC33.77■■■■□ 3
CDC42BPAQ5VT25 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC33.77■■■■□ 3
CDC42BPAQ5VT25 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
CDC42BPAQ5VT25 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC33.77■■■■□ 3
CDC42BPAQ5VT25 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
CDC42BPAQ5VT25 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC33.76■■■□□ 2.99
CDC42BPAQ5VT25 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC33.76■■■□□ 2.99
CDC42BPAQ5VT25 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC33.75■■■□□ 2.99
CDC42BPAQ5VT25 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC33.75■■■□□ 2.99
CDC42BPAQ5VT25 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC33.75■■■□□ 2.99
CDC42BPAQ5VT25 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC33.74■■■□□ 2.99
CDC42BPAQ5VT25 KRT19P1-201ENST00000405746 1186 ntBASIC33.74■■■□□ 2.99
CDC42BPAQ5VT25 CPT2-209ENST00000636935 803 ntTSL 5 BASIC33.74■■■□□ 2.99
CDC42BPAQ5VT25 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
CDC42BPAQ5VT25 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC33.74■■■□□ 2.99
CDC42BPAQ5VT25 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC33.74■■■□□ 2.99
CDC42BPAQ5VT25 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC33.73■■■□□ 2.99
CDC42BPAQ5VT25 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC33.73■■■□□ 2.99
CDC42BPAQ5VT25 AC020928.2-201ENST00000588717 2197 ntBASIC33.73■■■□□ 2.99
CDC42BPAQ5VT25 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC33.73■■■□□ 2.99
CDC42BPAQ5VT25 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC33.73■■■□□ 2.99
CDC42BPAQ5VT25 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
CDC42BPAQ5VT25 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
CDC42BPAQ5VT25 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC33.72■■■□□ 2.99
CDC42BPAQ5VT25 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC33.72■■■□□ 2.99
CDC42BPAQ5VT25 ABHD17AP1-201ENST00000358206 933 ntBASIC33.72■■■□□ 2.99
CDC42BPAQ5VT25 AC010141.3-201ENST00000456659 717 ntBASIC33.72■■■□□ 2.99
CDC42BPAQ5VT25 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
CDC42BPAQ5VT25 MFSD11-216ENST00000590393 1141 ntBASIC33.72■■■□□ 2.99
CDC42BPAQ5VT25 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
CDC42BPAQ5VT25 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC33.72■■■□□ 2.99
CDC42BPAQ5VT25 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC33.71■■■□□ 2.99
CDC42BPAQ5VT25 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC33.71■■■□□ 2.99
CDC42BPAQ5VT25 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC33.7■■■□□ 2.99
CDC42BPAQ5VT25 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC33.7■■■□□ 2.99
CDC42BPAQ5VT25 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.98
CDC42BPAQ5VT25 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC33.7■■■□□ 2.98
CDC42BPAQ5VT25 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC33.7■■■□□ 2.98
CDC42BPAQ5VT25 AL050303.2-201ENST00000619798 666 ntBASIC33.7■■■□□ 2.98
CDC42BPAQ5VT25 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
CDC42BPAQ5VT25 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
CDC42BPAQ5VT25 AL355802.2-201ENST00000402069 882 ntBASIC33.69■■■□□ 2.98
CDC42BPAQ5VT25 MAP2K4P1-201ENST00000438453 1195 ntBASIC33.69■■■□□ 2.98
CDC42BPAQ5VT25 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC33.68■■■□□ 2.98
CDC42BPAQ5VT25 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC33.68■■■□□ 2.98
CDC42BPAQ5VT25 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms