Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.09■■□□□ 1.61
SPDYE3A6NKU9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.09■■□□□ 1.61
SPDYE3A6NKU9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE3A6NKU9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE3A6NKU9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE3A6NKU9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE3A6NKU9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE3A6NKU9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE3A6NKU9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE3A6NKU9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SPDYE3A6NKU9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
SPDYE3A6NKU9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SPDYE3A6NKU9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.08■■□□□ 1.61
SPDYE3A6NKU9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.08■■□□□ 1.61
SPDYE3A6NKU9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.08■■□□□ 1.61
SPDYE3A6NKU9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SPDYE3A6NKU9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.08■■□□□ 1.61
SPDYE3A6NKU9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.08■■□□□ 1.61
SPDYE3A6NKU9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.6
SPDYE3A6NKU9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.08■■□□□ 1.6
SPDYE3A6NKU9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.07■■□□□ 1.6
SPDYE3A6NKU9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
SPDYE3A6NKU9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.07■■□□□ 1.6
SPDYE3A6NKU9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.07■■□□□ 1.6
SPDYE3A6NKU9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.07■■□□□ 1.6
SPDYE3A6NKU9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SPDYE3A6NKU9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SPDYE3A6NKU9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.06■■□□□ 1.6
SPDYE3A6NKU9 AL031602.1-201ENST00000633169 911 ntBASIC25.06■■□□□ 1.6
SPDYE3A6NKU9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
SPDYE3A6NKU9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SPDYE3A6NKU9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.06■■□□□ 1.6
SPDYE3A6NKU9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.06■■□□□ 1.6
SPDYE3A6NKU9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SPDYE3A6NKU9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE3A6NKU9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.05■■□□□ 1.6
SPDYE3A6NKU9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE3A6NKU9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.05■■□□□ 1.6
SPDYE3A6NKU9 AC087239.1-201ENST00000622671 572 ntBASIC25.05■■□□□ 1.6
SPDYE3A6NKU9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
SPDYE3A6NKU9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE3A6NKU9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.05■■□□□ 1.6
SPDYE3A6NKU9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE3A6NKU9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE3A6NKU9 DUSP8P5-201ENST00000422884 1815 ntBASIC25.05■■□□□ 1.6
SPDYE3A6NKU9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE3A6NKU9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.04■■□□□ 1.6
SPDYE3A6NKU9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SPDYE3A6NKU9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
SPDYE3A6NKU9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SPDYE3A6NKU9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.04■■□□□ 1.6
SPDYE3A6NKU9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
SPDYE3A6NKU9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SPDYE3A6NKU9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.04■■□□□ 1.6
SPDYE3A6NKU9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.04■■□□□ 1.6
SPDYE3A6NKU9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.04■■□□□ 1.6
SPDYE3A6NKU9 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SPDYE3A6NKU9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SPDYE3A6NKU9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SPDYE3A6NKU9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SPDYE3A6NKU9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.03■■□□□ 1.6
SPDYE3A6NKU9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
SPDYE3A6NKU9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.03■■□□□ 1.6
SPDYE3A6NKU9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SPDYE3A6NKU9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SPDYE3A6NKU9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SPDYE3A6NKU9 MIR572-201ENST00000384983 95 ntBASIC25.03■■□□□ 1.6
SPDYE3A6NKU9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC25.03■■□□□ 1.6
SPDYE3A6NKU9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SPDYE3A6NKU9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SPDYE3A6NKU9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SPDYE3A6NKU9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.02■■□□□ 1.6
SPDYE3A6NKU9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SPDYE3A6NKU9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SPDYE3A6NKU9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.02■■□□□ 1.6
SPDYE3A6NKU9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
SPDYE3A6NKU9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.02■■□□□ 1.6
SPDYE3A6NKU9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
SPDYE3A6NKU9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SPDYE3A6NKU9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPDYE3A6NKU9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPDYE3A6NKU9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPDYE3A6NKU9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPDYE3A6NKU9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
SPDYE3A6NKU9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
SPDYE3A6NKU9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPDYE3A6NKU9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SPDYE3A6NKU9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
SPDYE3A6NKU9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPDYE3A6NKU9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC25.01■■□□□ 1.59
SPDYE3A6NKU9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25■■□□□ 1.59
SPDYE3A6NKU9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
SPDYE3A6NKU9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SPDYE3A6NKU9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SPDYE3A6NKU9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25■■□□□ 1.59
SPDYE3A6NKU9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25■■□□□ 1.59
SPDYE3A6NKU9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25■■□□□ 1.59
SPDYE3A6NKU9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25■■□□□ 1.59
SPDYE3A6NKU9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
SPDYE3A6NKU9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms