Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TBC1D3FA6NER0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TBC1D3FA6NER0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TBC1D3FA6NER0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TBC1D3FA6NER0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
TBC1D3FA6NER0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TBC1D3FA6NER0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
TBC1D3FA6NER0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
TBC1D3FA6NER0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TBC1D3FA6NER0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TBC1D3FA6NER0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TBC1D3FA6NER0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
TBC1D3FA6NER0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
TBC1D3FA6NER0 AC068587.7-201ENST00000641602 218 ntBASIC21.98■■□□□ 1.11
TBC1D3FA6NER0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
TBC1D3FA6NER0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TBC1D3FA6NER0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TBC1D3FA6NER0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
TBC1D3FA6NER0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TBC1D3FA6NER0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.97■■□□□ 1.11
TBC1D3FA6NER0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.97■■□□□ 1.11
TBC1D3FA6NER0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.97■■□□□ 1.11
TBC1D3FA6NER0 KRT18P14-201ENST00000534205 1250 ntBASIC21.97■■□□□ 1.11
TBC1D3FA6NER0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TBC1D3FA6NER0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TBC1D3FA6NER0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
TBC1D3FA6NER0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TBC1D3FA6NER0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TBC1D3FA6NER0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TBC1D3FA6NER0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TBC1D3FA6NER0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TBC1D3FA6NER0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
TBC1D3FA6NER0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
TBC1D3FA6NER0 IKBKGP1-201ENST00000612193 1073 ntBASIC21.96■■□□□ 1.11
TBC1D3FA6NER0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TBC1D3FA6NER0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
TBC1D3FA6NER0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TBC1D3FA6NER0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TBC1D3FA6NER0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TBC1D3FA6NER0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.95■■□□□ 1.1
TBC1D3FA6NER0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
TBC1D3FA6NER0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.95■■□□□ 1.1
TBC1D3FA6NER0 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.95■■□□□ 1.1
TBC1D3FA6NER0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
TBC1D3FA6NER0 AC087239.1-201ENST00000622671 572 ntBASIC21.95■■□□□ 1.1
TBC1D3FA6NER0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TBC1D3FA6NER0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
TBC1D3FA6NER0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TBC1D3FA6NER0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.94■■□□□ 1.1
TBC1D3FA6NER0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TBC1D3FA6NER0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.94■■□□□ 1.1
TBC1D3FA6NER0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.94■■□□□ 1.1
TBC1D3FA6NER0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TBC1D3FA6NER0 TERF1P2-201ENST00000583350 1212 ntBASIC21.94■■□□□ 1.1
TBC1D3FA6NER0 NTF6G-201ENST00000591094 616 ntBASIC21.94■■□□□ 1.1
TBC1D3FA6NER0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TBC1D3FA6NER0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.94■■□□□ 1.1
TBC1D3FA6NER0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TBC1D3FA6NER0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TBC1D3FA6NER0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TBC1D3FA6NER0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TBC1D3FA6NER0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TBC1D3FA6NER0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.93■■□□□ 1.1
TBC1D3FA6NER0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.93■■□□□ 1.1
TBC1D3FA6NER0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TBC1D3FA6NER0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TBC1D3FA6NER0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TBC1D3FA6NER0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.92■■□□□ 1.1
TBC1D3FA6NER0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.92■■□□□ 1.1
TBC1D3FA6NER0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TBC1D3FA6NER0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.92■■□□□ 1.1
TBC1D3FA6NER0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TBC1D3FA6NER0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.92■■□□□ 1.1
TBC1D3FA6NER0 AL137784.2-201ENST00000607332 1000 ntBASIC21.92■■□□□ 1.1
TBC1D3FA6NER0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.92■■□□□ 1.1
TBC1D3FA6NER0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TBC1D3FA6NER0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.92■■□□□ 1.1
TBC1D3FA6NER0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.92■■□□□ 1.1
TBC1D3FA6NER0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
TBC1D3FA6NER0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.92■■□□□ 1.1
TBC1D3FA6NER0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TBC1D3FA6NER0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TBC1D3FA6NER0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TBC1D3FA6NER0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TBC1D3FA6NER0 AC010141.3-201ENST00000456659 717 ntBASIC21.91■■□□□ 1.1
TBC1D3FA6NER0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.91■■□□□ 1.1
TBC1D3FA6NER0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
TBC1D3FA6NER0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
TBC1D3FA6NER0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TBC1D3FA6NER0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TBC1D3FA6NER0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.91■■□□□ 1.1
TBC1D3FA6NER0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.91■■□□□ 1.1
TBC1D3FA6NER0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
TBC1D3FA6NER0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TBC1D3FA6NER0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TBC1D3FA6NER0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TBC1D3FA6NER0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.9■■□□□ 1.1
TBC1D3FA6NER0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TBC1D3FA6NER0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.9■■□□□ 1.1
TBC1D3FA6NER0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms