Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV1A0A0A0MS02 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV1A0A0A0MS02 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV1A0A0A0MS02 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV1A0A0A0MS02 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV1A0A0A0MS02 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.9■□□□□ 0.14
TRGV1A0A0A0MS02 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.9■□□□□ 0.14
TRGV1A0A0A0MS02 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.9■□□□□ 0.14
TRGV1A0A0A0MS02 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRGV1A0A0A0MS02 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRGV1A0A0A0MS02 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRGV1A0A0A0MS02 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRGV1A0A0A0MS02 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRGV1A0A0A0MS02 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRGV1A0A0A0MS02 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRGV1A0A0A0MS02 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRGV1A0A0A0MS02 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRGV1A0A0A0MS02 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRGV1A0A0A0MS02 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRGV1A0A0A0MS02 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRGV1A0A0A0MS02 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRGV1A0A0A0MS02 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.89■□□□□ 0.13
TRGV1A0A0A0MS02 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRGV1A0A0A0MS02 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.88■□□□□ 0.13
TRGV1A0A0A0MS02 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRGV1A0A0A0MS02 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRGV1A0A0A0MS02 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRGV1A0A0A0MS02 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRGV1A0A0A0MS02 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.88■□□□□ 0.13
TRGV1A0A0A0MS02 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRGV1A0A0A0MS02 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRGV1A0A0A0MS02 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRGV1A0A0A0MS02 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.88■□□□□ 0.13
TRGV1A0A0A0MS02 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.88■□□□□ 0.13
TRGV1A0A0A0MS02 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRGV1A0A0A0MS02 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRGV1A0A0A0MS02 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRGV1A0A0A0MS02 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRGV1A0A0A0MS02 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRGV1A0A0A0MS02 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRGV1A0A0A0MS02 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 MIR3621-201ENST00000580529 85 ntBASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 AC241377.3-202ENST00000626088 1088 ntBASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 AC241585.3-202ENST00000628937 1088 ntBASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 AC245100.8-202ENST00000629247 1058 ntBASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.87■□□□□ 0.13
TRGV1A0A0A0MS02 AC004687.1-201ENST00000579003 1625 ntBASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 AL117328.2-201ENST00000624617 1940 ntBASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 TERT-206ENST00000508104 2486 ntTSL 5 BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV1A0A0A0MS02 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 SRD5A1P1-201ENST00000442297 786 ntBASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.85■□□□□ 0.13
TRGV1A0A0A0MS02 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms