Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.68■□□□□ 0.9
YIPF4Q9BSR8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
YIPF4Q9BSR8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.68■□□□□ 0.9
YIPF4Q9BSR8 DUX4L4-201ENST00000566884 1269 ntBASIC20.68■□□□□ 0.9
YIPF4Q9BSR8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
YIPF4Q9BSR8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
YIPF4Q9BSR8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.68■□□□□ 0.9
YIPF4Q9BSR8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
YIPF4Q9BSR8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
YIPF4Q9BSR8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
YIPF4Q9BSR8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
YIPF4Q9BSR8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.68■□□□□ 0.9
YIPF4Q9BSR8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
YIPF4Q9BSR8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.67■□□□□ 0.9
YIPF4Q9BSR8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
YIPF4Q9BSR8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.67■□□□□ 0.9
YIPF4Q9BSR8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
YIPF4Q9BSR8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
YIPF4Q9BSR8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
YIPF4Q9BSR8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
YIPF4Q9BSR8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
YIPF4Q9BSR8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
YIPF4Q9BSR8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.67■□□□□ 0.9
YIPF4Q9BSR8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
YIPF4Q9BSR8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
YIPF4Q9BSR8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
YIPF4Q9BSR8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
YIPF4Q9BSR8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.67■□□□□ 0.9
YIPF4Q9BSR8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
YIPF4Q9BSR8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
YIPF4Q9BSR8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
YIPF4Q9BSR8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.66■□□□□ 0.9
YIPF4Q9BSR8 AL356740.2-201ENST00000601559 647 ntBASIC20.66■□□□□ 0.9
YIPF4Q9BSR8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.66■□□□□ 0.9
YIPF4Q9BSR8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
YIPF4Q9BSR8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
YIPF4Q9BSR8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.66■□□□□ 0.9
YIPF4Q9BSR8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
YIPF4Q9BSR8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
YIPF4Q9BSR8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 AC079834.2-201ENST00000609776 1949 ntBASIC20.65■□□□□ 0.9
YIPF4Q9BSR8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
YIPF4Q9BSR8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
YIPF4Q9BSR8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
YIPF4Q9BSR8 AC004687.1-201ENST00000579003 1625 ntBASIC20.64■□□□□ 0.9
YIPF4Q9BSR8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
YIPF4Q9BSR8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YIPF4Q9BSR8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
YIPF4Q9BSR8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.64■□□□□ 0.89
YIPF4Q9BSR8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.64■□□□□ 0.89
YIPF4Q9BSR8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YIPF4Q9BSR8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YIPF4Q9BSR8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.64■□□□□ 0.89
YIPF4Q9BSR8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YIPF4Q9BSR8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.64■□□□□ 0.89
YIPF4Q9BSR8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YIPF4Q9BSR8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF4Q9BSR8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF4Q9BSR8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF4Q9BSR8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.63■□□□□ 0.89
YIPF4Q9BSR8 AC009086.3-201ENST00000623486 1008 ntBASIC20.63■□□□□ 0.89
YIPF4Q9BSR8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
YIPF4Q9BSR8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF4Q9BSR8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF4Q9BSR8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF4Q9BSR8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
YIPF4Q9BSR8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
YIPF4Q9BSR8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
YIPF4Q9BSR8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
YIPF4Q9BSR8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
YIPF4Q9BSR8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
YIPF4Q9BSR8 MIR3621-201ENST00000580529 85 ntBASIC20.62■□□□□ 0.89
YIPF4Q9BSR8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.62■□□□□ 0.89
YIPF4Q9BSR8 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.62■□□□□ 0.89
YIPF4Q9BSR8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
YIPF4Q9BSR8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
YIPF4Q9BSR8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
YIPF4Q9BSR8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.62■□□□□ 0.89
YIPF4Q9BSR8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF4Q9BSR8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF4Q9BSR8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF4Q9BSR8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF4Q9BSR8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms