Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
SMOQ99835 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
SMOQ99835 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
SMOQ99835 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SMOQ99835 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SMOQ99835 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SMOQ99835 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMOQ99835 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMOQ99835 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SMOQ99835 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.25■■□□□ 1.31
SMOQ99835 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.25■■□□□ 1.31
SMOQ99835 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SMOQ99835 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SMOQ99835 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SMOQ99835 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMOQ99835 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.24■■□□□ 1.31
SMOQ99835 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMOQ99835 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.24■■□□□ 1.31
SMOQ99835 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMOQ99835 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMOQ99835 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
SMOQ99835 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
SMOQ99835 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMOQ99835 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.24■■□□□ 1.31
SMOQ99835 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.24■■□□□ 1.31
SMOQ99835 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
SMOQ99835 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMOQ99835 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.24■■□□□ 1.31
SMOQ99835 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SMOQ99835 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SMOQ99835 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SMOQ99835 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SMOQ99835 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMOQ99835 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.23■■□□□ 1.31
SMOQ99835 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.23■■□□□ 1.31
SMOQ99835 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.23■■□□□ 1.31
SMOQ99835 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.23■■□□□ 1.31
SMOQ99835 TSPY26P-201ENST00000476365 1326 ntBASIC23.23■■□□□ 1.31
SMOQ99835 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMOQ99835 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SMOQ99835 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMOQ99835 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMOQ99835 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SMOQ99835 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.23■■□□□ 1.31
SMOQ99835 DUSP8P5-201ENST00000422884 1815 ntBASIC23.22■■□□□ 1.31
SMOQ99835 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMOQ99835 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.22■■□□□ 1.31
SMOQ99835 IGHV3-19-201ENST00000521488 291 ntBASIC23.22■■□□□ 1.31
SMOQ99835 AP005435.1-201ENST00000529293 1178 ntBASIC23.22■■□□□ 1.31
SMOQ99835 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMOQ99835 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SMOQ99835 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.22■■□□□ 1.31
SMOQ99835 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMOQ99835 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.21■■□□□ 1.31
SMOQ99835 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
SMOQ99835 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMOQ99835 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMOQ99835 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SMOQ99835 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMOQ99835 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.21■■□□□ 1.31
SMOQ99835 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMOQ99835 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.21■■□□□ 1.31
SMOQ99835 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.21■■□□□ 1.31
SMOQ99835 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMOQ99835 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SMOQ99835 AL031602.1-201ENST00000633169 911 ntBASIC23.21■■□□□ 1.31
SMOQ99835 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
SMOQ99835 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMOQ99835 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.21■■□□□ 1.31
SMOQ99835 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMOQ99835 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SMOQ99835 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.2■■□□□ 1.3
SMOQ99835 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMOQ99835 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.2■■□□□ 1.3
SMOQ99835 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.2■■□□□ 1.3
SMOQ99835 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMOQ99835 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.2■■□□□ 1.3
SMOQ99835 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.2■■□□□ 1.3
SMOQ99835 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMOQ99835 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.2■■□□□ 1.3
SMOQ99835 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.2■■□□□ 1.3
SMOQ99835 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMOQ99835 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.19■■□□□ 1.3
SMOQ99835 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMOQ99835 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.19■■□□□ 1.3
SMOQ99835 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.19■■□□□ 1.3
SMOQ99835 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMOQ99835 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMOQ99835 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
SMOQ99835 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.18■■□□□ 1.3
SMOQ99835 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.18■■□□□ 1.3
SMOQ99835 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
SMOQ99835 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.18■■□□□ 1.3
SMOQ99835 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMOQ99835 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.18■■□□□ 1.3
SMOQ99835 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.18■■□□□ 1.3
SMOQ99835 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMOQ99835 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMOQ99835 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMOQ99835 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms