Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.42■□□□□ 0.86
SDF2Q99470 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.42■□□□□ 0.86
SDF2Q99470 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SDF2Q99470 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SDF2Q99470 AL512631.2-201ENST00000604634 923 ntBASIC20.42■□□□□ 0.86
SDF2Q99470 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDF2Q99470 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
SDF2Q99470 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDF2Q99470 EP400NL-214ENST00000641289 2402 ntBASIC20.42■□□□□ 0.86
SDF2Q99470 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.42■□□□□ 0.86
SDF2Q99470 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SDF2Q99470 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDF2Q99470 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SDF2Q99470 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDF2Q99470 ECEL1P1-201ENST00000373592 1742 ntBASIC20.41■□□□□ 0.86
SDF2Q99470 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDF2Q99470 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDF2Q99470 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDF2Q99470 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SDF2Q99470 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDF2Q99470 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDF2Q99470 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.4■□□□□ 0.86
SDF2Q99470 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SDF2Q99470 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.4■□□□□ 0.86
SDF2Q99470 AC099791.2-201ENST00000605725 427 ntBASIC20.4■□□□□ 0.86
SDF2Q99470 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SDF2Q99470 AC242852.2-201ENST00000615738 1807 ntBASIC20.39■□□□□ 0.86
SDF2Q99470 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SDF2Q99470 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
SDF2Q99470 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SDF2Q99470 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDF2Q99470 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SDF2Q99470 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDF2Q99470 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDF2Q99470 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.39■□□□□ 0.85
SDF2Q99470 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.39■□□□□ 0.85
SDF2Q99470 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.39■□□□□ 0.85
SDF2Q99470 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SDF2Q99470 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.39■□□□□ 0.85
SDF2Q99470 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.39■□□□□ 0.85
SDF2Q99470 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.39■□□□□ 0.85
SDF2Q99470 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SDF2Q99470 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SDF2Q99470 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDF2Q99470 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SDF2Q99470 LINC01960-201ENST00000563759 1884 ntBASIC20.39■□□□□ 0.85
SDF2Q99470 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SDF2Q99470 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.38■□□□□ 0.85
SDF2Q99470 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SDF2Q99470 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDF2Q99470 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDF2Q99470 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.38■□□□□ 0.85
SDF2Q99470 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDF2Q99470 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDF2Q99470 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDF2Q99470 AC006455.2-201ENST00000429931 906 ntBASIC20.38■□□□□ 0.85
SDF2Q99470 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.38■□□□□ 0.85
SDF2Q99470 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.38■□□□□ 0.85
SDF2Q99470 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDF2Q99470 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDF2Q99470 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDF2Q99470 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.37■□□□□ 0.85
SDF2Q99470 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.37■□□□□ 0.85
SDF2Q99470 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SDF2Q99470 LINC00526-201ENST00000581067 1875 ntBASIC20.37■□□□□ 0.85
SDF2Q99470 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
SDF2Q99470 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SDF2Q99470 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SDF2Q99470 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SDF2Q99470 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.37■□□□□ 0.85
SDF2Q99470 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SDF2Q99470 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SDF2Q99470 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SDF2Q99470 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SDF2Q99470 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDF2Q99470 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDF2Q99470 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDF2Q99470 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SDF2Q99470 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SDF2Q99470 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.36■□□□□ 0.85
SDF2Q99470 SRD5A1P1-201ENST00000442297 786 ntBASIC20.36■□□□□ 0.85
SDF2Q99470 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.36■□□□□ 0.85
SDF2Q99470 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.36■□□□□ 0.85
SDF2Q99470 pRNA.6-201ENST00000610482 90 ntBASIC20.36■□□□□ 0.85
SDF2Q99470 pRNA.5-201ENST00000612139 90 ntBASIC20.36■□□□□ 0.85
SDF2Q99470 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDF2Q99470 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDF2Q99470 pRNA.11-201ENST00000618423 90 ntBASIC20.36■□□□□ 0.85
SDF2Q99470 pRNA.13-201ENST00000619112 90 ntBASIC20.36■□□□□ 0.85
SDF2Q99470 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDF2Q99470 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
SDF2Q99470 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.36■□□□□ 0.85
SDF2Q99470 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDF2Q99470 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDF2Q99470 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDF2Q99470 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDF2Q99470 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDF2Q99470 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SDF2Q99470 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.35■□□□□ 0.85
SDF2Q99470 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms