Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHCHD1Q96BP2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHCHD1Q96BP2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHCHD1Q96BP2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CHCHD1Q96BP2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHCHD1Q96BP2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHCHD1Q96BP2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHCHD1Q96BP2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.08■□□□□ 0.16
CHCHD1Q96BP2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHCHD1Q96BP2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHCHD1Q96BP2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHCHD1Q96BP2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CHCHD1Q96BP2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CHCHD1Q96BP2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CHCHD1Q96BP2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.07■□□□□ 0.16
CHCHD1Q96BP2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.07■□□□□ 0.16
CHCHD1Q96BP2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
CHCHD1Q96BP2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHCHD1Q96BP2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CHCHD1Q96BP2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHCHD1Q96BP2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.05■□□□□ 0.16
CHCHD1Q96BP2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHCHD1Q96BP2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHCHD1Q96BP2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CHCHD1Q96BP2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHCHD1Q96BP2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CHCHD1Q96BP2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
CHCHD1Q96BP2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.05■□□□□ 0.16
CHCHD1Q96BP2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC16.05■□□□□ 0.16
CHCHD1Q96BP2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHCHD1Q96BP2 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.05■□□□□ 0.16
CHCHD1Q96BP2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHCHD1Q96BP2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHCHD1Q96BP2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHCHD1Q96BP2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CHCHD1Q96BP2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHCHD1Q96BP2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CHCHD1Q96BP2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHCHD1Q96BP2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CHCHD1Q96BP2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHCHD1Q96BP2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.04■□□□□ 0.16
CHCHD1Q96BP2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHCHD1Q96BP2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHCHD1Q96BP2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHCHD1Q96BP2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHCHD1Q96BP2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CHCHD1Q96BP2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHCHD1Q96BP2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.03■□□□□ 0.16
CHCHD1Q96BP2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHCHD1Q96BP2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHCHD1Q96BP2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.03■□□□□ 0.16
CHCHD1Q96BP2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.03■□□□□ 0.16
CHCHD1Q96BP2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.03■□□□□ 0.16
CHCHD1Q96BP2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.03■□□□□ 0.16
CHCHD1Q96BP2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.03■□□□□ 0.16
CHCHD1Q96BP2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.03■□□□□ 0.16
CHCHD1Q96BP2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHCHD1Q96BP2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHCHD1Q96BP2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHCHD1Q96BP2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHCHD1Q96BP2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHCHD1Q96BP2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHCHD1Q96BP2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.02■□□□□ 0.16
CHCHD1Q96BP2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHCHD1Q96BP2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHCHD1Q96BP2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHCHD1Q96BP2 MIR3665-201ENST00000578708 105 ntBASIC16.02■□□□□ 0.16
CHCHD1Q96BP2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHCHD1Q96BP2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CHCHD1Q96BP2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHCHD1Q96BP2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CHCHD1Q96BP2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CHCHD1Q96BP2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CHCHD1Q96BP2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.01■□□□□ 0.15
CHCHD1Q96BP2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHCHD1Q96BP2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.01■□□□□ 0.15
CHCHD1Q96BP2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.01■□□□□ 0.15
CHCHD1Q96BP2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CHCHD1Q96BP2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.01■□□□□ 0.15
CHCHD1Q96BP2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHCHD1Q96BP2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC16.01■□□□□ 0.15
CHCHD1Q96BP2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms