Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC233992.3-201ENST00000607491 485 ntBASIC16.44■□□□□ 0.22
CMC4P56277 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMC4P56277 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CMC4P56277 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CMC4P56277 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMC4P56277 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CMC4P56277 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CMC4P56277 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMC4P56277 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.44■□□□□ 0.22
CMC4P56277 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMC4P56277 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.44■□□□□ 0.22
CMC4P56277 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CMC4P56277 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.43■□□□□ 0.22
CMC4P56277 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CMC4P56277 AC027682.1-201ENST00000562846 899 ntBASIC16.43■□□□□ 0.22
CMC4P56277 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.43■□□□□ 0.22
CMC4P56277 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CMC4P56277 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.43■□□□□ 0.22
CMC4P56277 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CMC4P56277 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.43■□□□□ 0.22
CMC4P56277 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CMC4P56277 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CMC4P56277 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CMC4P56277 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CMC4P56277 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CMC4P56277 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.42■□□□□ 0.22
CMC4P56277 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CMC4P56277 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CMC4P56277 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.42■□□□□ 0.22
CMC4P56277 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.42■□□□□ 0.22
CMC4P56277 AP005435.1-201ENST00000529293 1178 ntBASIC16.42■□□□□ 0.22
CMC4P56277 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.42■□□□□ 0.22
CMC4P56277 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CMC4P56277 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.42■□□□□ 0.22
CMC4P56277 DUSP8P5-201ENST00000422884 1815 ntBASIC16.42■□□□□ 0.22
CMC4P56277 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.42■□□□□ 0.22
CMC4P56277 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.42■□□□□ 0.22
CMC4P56277 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CMC4P56277 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMC4P56277 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CMC4P56277 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CMC4P56277 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.41■□□□□ 0.22
CMC4P56277 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.41■□□□□ 0.22
CMC4P56277 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CMC4P56277 AC005837.3-201ENST00000612163 286 ntBASIC16.41■□□□□ 0.22
CMC4P56277 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.41■□□□□ 0.22
CMC4P56277 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.41■□□□□ 0.22
CMC4P56277 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMC4P56277 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CMC4P56277 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMC4P56277 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.4■□□□□ 0.22
CMC4P56277 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.4■□□□□ 0.22
CMC4P56277 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMC4P56277 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CMC4P56277 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CMC4P56277 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CMC4P56277 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMC4P56277 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CMC4P56277 AC091305.1-201ENST00000479476 895 ntBASIC16.4■□□□□ 0.22
CMC4P56277 AC142381.2-201ENST00000566120 298 ntBASIC16.4■□□□□ 0.22
CMC4P56277 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CMC4P56277 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CMC4P56277 AC004687.1-201ENST00000579003 1625 ntBASIC16.4■□□□□ 0.22
CMC4P56277 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMC4P56277 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CMC4P56277 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.4■□□□□ 0.22
CMC4P56277 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CMC4P56277 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CMC4P56277 RASA4CP-201ENST00000424092 1398 ntBASIC16.39■□□□□ 0.21
CMC4P56277 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMC4P56277 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.39■□□□□ 0.21
CMC4P56277 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.39■□□□□ 0.21
CMC4P56277 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
CMC4P56277 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMC4P56277 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.39■□□□□ 0.21
CMC4P56277 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMC4P56277 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CMC4P56277 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMC4P56277 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMC4P56277 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CMC4P56277 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.39■□□□□ 0.21
CMC4P56277 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CMC4P56277 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CMC4P56277 AC126544.1-201ENST00000580842 1059 ntBASIC16.39■□□□□ 0.21
CMC4P56277 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CMC4P56277 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.39■□□□□ 0.21
CMC4P56277 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CMC4P56277 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CMC4P56277 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CMC4P56277 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CMC4P56277 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMC4P56277 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMC4P56277 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CMC4P56277 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMC4P56277 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMC4P56277 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMC4P56277 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.38■□□□□ 0.21
CMC4P56277 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.38■□□□□ 0.21
CMC4P56277 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.38■□□□□ 0.21
CMC4P56277 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms