Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPS4Y1P22090 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPS4Y1P22090 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.28■□□□□ 0.84
RPS4Y1P22090 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.28■□□□□ 0.84
RPS4Y1P22090 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPS4Y1P22090 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
RPS4Y1P22090 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPS4Y1P22090 AC080038.3-201ENST00000623346 1952 ntBASIC20.28■□□□□ 0.84
RPS4Y1P22090 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPS4Y1P22090 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RPS4Y1P22090 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4Y1P22090 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4Y1P22090 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4Y1P22090 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
RPS4Y1P22090 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4Y1P22090 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RPS4Y1P22090 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4Y1P22090 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.27■□□□□ 0.84
RPS4Y1P22090 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4Y1P22090 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4Y1P22090 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RPS4Y1P22090 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.27■□□□□ 0.84
RPS4Y1P22090 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4Y1P22090 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.27■□□□□ 0.84
RPS4Y1P22090 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.27■□□□□ 0.84
RPS4Y1P22090 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4Y1P22090 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4Y1P22090 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4Y1P22090 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
RPS4Y1P22090 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
RPS4Y1P22090 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPS4Y1P22090 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.27■□□□□ 0.83
RPS4Y1P22090 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPS4Y1P22090 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPS4Y1P22090 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.26■□□□□ 0.83
RPS4Y1P22090 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RPS4Y1P22090 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.26■□□□□ 0.83
RPS4Y1P22090 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
RPS4Y1P22090 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPS4Y1P22090 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.26■□□□□ 0.83
RPS4Y1P22090 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.26■□□□□ 0.83
RPS4Y1P22090 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPS4Y1P22090 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.26■□□□□ 0.83
RPS4Y1P22090 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPS4Y1P22090 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4Y1P22090 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RPS4Y1P22090 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.25■□□□□ 0.83
RPS4Y1P22090 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4Y1P22090 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4Y1P22090 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RPS4Y1P22090 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4Y1P22090 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4Y1P22090 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.25■□□□□ 0.83
RPS4Y1P22090 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.25■□□□□ 0.83
RPS4Y1P22090 AL512631.2-201ENST00000604634 923 ntBASIC20.25■□□□□ 0.83
RPS4Y1P22090 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.25■□□□□ 0.83
RPS4Y1P22090 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.25■□□□□ 0.83
RPS4Y1P22090 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4Y1P22090 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
RPS4Y1P22090 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RPS4Y1P22090 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS4Y1P22090 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.24■□□□□ 0.83
RPS4Y1P22090 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.24■□□□□ 0.83
RPS4Y1P22090 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS4Y1P22090 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.24■□□□□ 0.83
RPS4Y1P22090 AC006455.2-201ENST00000429931 906 ntBASIC20.24■□□□□ 0.83
RPS4Y1P22090 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.24■□□□□ 0.83
RPS4Y1P22090 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS4Y1P22090 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.24■□□□□ 0.83
RPS4Y1P22090 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4Y1P22090 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4Y1P22090 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4Y1P22090 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4Y1P22090 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4Y1P22090 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4Y1P22090 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4Y1P22090 AL356441.2-201ENST00000443009 864 ntBASIC20.23■□□□□ 0.83
RPS4Y1P22090 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.23■□□□□ 0.83
RPS4Y1P22090 CA15P2-201ENST00000611168 834 ntBASIC20.23■□□□□ 0.83
RPS4Y1P22090 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4Y1P22090 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4Y1P22090 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4Y1P22090 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.23■□□□□ 0.83
RPS4Y1P22090 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4Y1P22090 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4Y1P22090 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4Y1P22090 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4Y1P22090 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4Y1P22090 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4Y1P22090 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4Y1P22090 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.22■□□□□ 0.83
RPS4Y1P22090 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4Y1P22090 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RPS4Y1P22090 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4Y1P22090 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RPS4Y1P22090 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RPS4Y1P22090 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPS4Y1P22090 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPS4Y1P22090 AC092053.2-201ENST00000640557 1818 ntBASIC20.21■□□□□ 0.83
RPS4Y1P22090 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms