Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNSO60931 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.72■□□□□ 0.91
CTNSO60931 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.71■□□□□ 0.91
CTNSO60931 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNSO60931 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNSO60931 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CTNSO60931 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.71■□□□□ 0.91
CTNSO60931 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CTNSO60931 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.71■□□□□ 0.91
CTNSO60931 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.71■□□□□ 0.91
CTNSO60931 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTNSO60931 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CTNSO60931 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CTNSO60931 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.7■□□□□ 0.91
CTNSO60931 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTNSO60931 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.7■□□□□ 0.9
CTNSO60931 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTNSO60931 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CTNSO60931 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.7■□□□□ 0.9
CTNSO60931 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CTNSO60931 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CTNSO60931 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.7■□□□□ 0.9
CTNSO60931 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CTNSO60931 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.7■□□□□ 0.9
CTNSO60931 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
CTNSO60931 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CTNSO60931 AC133561.1-201ENST00000568600 2415 ntBASIC20.69■□□□□ 0.9
CTNSO60931 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CTNSO60931 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTNSO60931 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTNSO60931 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CTNSO60931 MIR638-201ENST00000385237 100 ntBASIC20.69■□□□□ 0.9
CTNSO60931 BX842568.3-201ENST00000418104 571 ntBASIC20.69■□□□□ 0.9
CTNSO60931 AL031432.3-201ENST00000607698 485 ntBASIC20.69■□□□□ 0.9
CTNSO60931 AC005837.3-201ENST00000612163 286 ntBASIC20.69■□□□□ 0.9
CTNSO60931 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CTNSO60931 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.69■□□□□ 0.9
CTNSO60931 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.69■□□□□ 0.9
CTNSO60931 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTNSO60931 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTNSO60931 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CTNSO60931 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTNSO60931 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.68■□□□□ 0.9
CTNSO60931 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTNSO60931 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.68■□□□□ 0.9
CTNSO60931 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.68■□□□□ 0.9
CTNSO60931 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTNSO60931 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.68■□□□□ 0.9
CTNSO60931 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.68■□□□□ 0.9
CTNSO60931 AC233992.3-201ENST00000607491 485 ntBASIC20.68■□□□□ 0.9
CTNSO60931 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.68■□□□□ 0.9
CTNSO60931 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTNSO60931 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTNSO60931 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTNSO60931 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.67■□□□□ 0.9
CTNSO60931 AC012676.1-201ENST00000574705 1949 ntBASIC20.67■□□□□ 0.9
CTNSO60931 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTNSO60931 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTNSO60931 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CTNSO60931 SLC47A1P1-202ENST00000449666 945 ntBASIC20.67■□□□□ 0.9
CTNSO60931 SUDS3P1-201ENST00000505831 966 ntBASIC20.67■□□□□ 0.9
CTNSO60931 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.67■□□□□ 0.9
CTNSO60931 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CTNSO60931 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.67■□□□□ 0.9
CTNSO60931 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTNSO60931 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTNSO60931 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTNSO60931 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.67■□□□□ 0.9
CTNSO60931 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CTNSO60931 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CTNSO60931 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTNSO60931 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTNSO60931 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CTNSO60931 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.67■□□□□ 0.9
CTNSO60931 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTNSO60931 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.66■□□□□ 0.9
CTNSO60931 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNSO60931 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTNSO60931 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.66■□□□□ 0.9
CTNSO60931 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.66■□□□□ 0.9
CTNSO60931 AC010525.1-201ENST00000585559 441 ntBASIC20.66■□□□□ 0.9
CTNSO60931 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNSO60931 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNSO60931 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTNSO60931 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNSO60931 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CTNSO60931 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.66■□□□□ 0.9
CTNSO60931 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.66■□□□□ 0.9
CTNSO60931 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTNSO60931 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNSO60931 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTNSO60931 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.65■□□□□ 0.9
CTNSO60931 AC008764.7-201ENST00000593779 1081 ntBASIC20.65■□□□□ 0.9
CTNSO60931 AL136967.2-201ENST00000623968 743 ntBASIC20.65■□□□□ 0.9
CTNSO60931 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTNSO60931 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTNSO60931 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.64■□□□□ 0.9
CTNSO60931 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTNSO60931 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTNSO60931 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms