Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 YGR125WYGR125W 3111 nt5.01□□□□□ -1.61
TY1B-HO13535 MRPL11YDL202W 750 nt5.01□□□□□ -1.61
TY1B-HO13535 PRE4YFR050C 801 nt5.01□□□□□ -1.61
TY1B-HO13535 PFK26YIL107C 2484 nt5□□□□□ -1.61
TY1B-HO13535 SRO7YPR032W 3102 nt5□□□□□ -1.61
TY1B-HO13535 SWP82YFL049W 1872 nt5□□□□□ -1.61
TY1B-HO13535 ECM22YLR228C 2445 nt4.99□□□□□ -1.61
TY1B-HO13535 CDC11YJR076C 1248 nt4.99□□□□□ -1.61
TY1B-HO13535 YKL033W-AYKL033W-A 711 nt4.99□□□□□ -1.61
TY1B-HO13535 ENA2YDR039C 3276 nt4.99□□□□□ -1.61
TY1B-HO13535 ENA1YDR040C 3276 nt4.99□□□□□ -1.61
TY1B-HO13535 STI1YOR027W 1770 nt4.99□□□□□ -1.61
TY1B-HO13535 GUF1YLR289W 1938 nt4.99□□□□□ -1.61
TY1B-HO13535 ARO4YBR249C 1113 nt4.99□□□□□ -1.61
TY1B-HO13535 RPL30YGL030W 318 nt4.98□□□□□ -1.61
TY1B-HO13535 YJR020WYJR020W 333 nt4.98□□□□□ -1.61
TY1B-HO13535 PIR1YKL164C 1026 nt4.98□□□□□ -1.61
TY1B-HO13535 RUF5-1RUF5-1 710 nt4.98□□□□□ -1.61
TY1B-HO13535 RUF5-2RUF5-2 710 nt4.98□□□□□ -1.61
TY1B-HO13535 NUP60YAR002W 1620 nt4.98□□□□□ -1.61
TY1B-HO13535 NTO1YPR031W 2247 nt4.98□□□□□ -1.61
TY1B-HO13535 TPO2YGR138C 1845 nt4.97□□□□□ -1.61
TY1B-HO13535 SOF1YLL011W 1470 nt4.97□□□□□ -1.61
TY1B-HO13535 INN1YNL152W 1230 nt4.96□□□□□ -1.61
TY1B-HO13535 MLH2YLR035C 2088 nt4.96□□□□□ -1.62
TY1B-HO13535 MSN2YMR037C 2115 nt4.96□□□□□ -1.62
TY1B-HO13535 HMF1YER057C 390 nt4.96□□□□□ -1.62
TY1B-HO13535 PEA2YER149C 1263 nt4.96□□□□□ -1.62
TY1B-HO13535 ERG2YMR202W 669 nt4.96□□□□□ -1.62
TY1B-HO13535 TPM1YNL079C 600 nt4.96□□□□□ -1.62
TY1B-HO13535 ENV9YOR246C 993 nt4.96□□□□□ -1.62
TY1B-HO13535 THR4YCR053W 1545 nt4.95□□□□□ -1.62
TY1B-HO13535 MDR1YGR100W 2853 nt4.95□□□□□ -1.62
TY1B-HO13535 RPS8BYER102W 603 nt4.95□□□□□ -1.62
TY1B-HO13535 SOH1YGL127C 384 nt4.95□□□□□ -1.62
TY1B-HO13535 YHL034W-AYHL034W-A 462 nt4.95□□□□□ -1.62
TY1B-HO13535 RPS8AYBL072C 603 nt4.95□□□□□ -1.62
TY1B-HO13535 NOP2YNL061W 1857 nt4.95□□□□□ -1.62
TY1B-HO13535 DNM1YLL001W 2274 nt4.94□□□□□ -1.62
TY1B-HO13535 MRPS35YGR165W 1038 nt4.94□□□□□ -1.62
TY1B-HO13535 SOP4YJL192C 705 nt4.94□□□□□ -1.62
TY1B-HO13535 VID28YIL017C 2766 nt4.94□□□□□ -1.62
TY1B-HO13535 CHO2YGR157W 2610 nt4.94□□□□□ -1.62
TY1B-HO13535 NHX1YDR456W 1902 nt4.94□□□□□ -1.62
TY1B-HO13535 RAD54YGL163C 2697 nt4.94□□□□□ -1.62
TY1B-HO13535 VHC1YBR235W 3363 nt4.93□□□□□ -1.62
TY1B-HO13535 AUR1YKL004W 1206 nt4.92□□□□□ -1.62
TY1B-HO13535 CFD1YIL003W 882 nt4.91□□□□□ -1.62
TY1B-HO13535 CDC21YOR074C 915 nt4.91□□□□□ -1.62
TY1B-HO13535 VPS21YOR089C 633 nt4.91□□□□□ -1.62
TY1B-HO13535 NOC2YOR206W 2133 nt4.9□□□□□ -1.62
TY1B-HO13535 PMC1YGL006W 3522 nt4.9□□□□□ -1.63
TY1B-HO13535 ERG26YGL001C 1050 nt4.9□□□□□ -1.63
TY1B-HO13535 RRG9YNL213C 645 nt4.9□□□□□ -1.63
TY1B-HO13535 GPR1YDL035C 2886 nt4.9□□□□□ -1.63
TY1B-HO13535 NHP10YDL002C 612 nt4.89□□□□□ -1.63
TY1B-HO13535 YMR087WYMR087W 855 nt4.89□□□□□ -1.63
TY1B-HO13535 SGT1YOR057W 1188 nt4.89□□□□□ -1.63
TY1B-HO13535 TFB4YPR056W 1017 nt4.89□□□□□ -1.63
TY1B-HO13535 NMA111YNL123W 2994 nt4.89□□□□□ -1.63
TY1B-HO13535 MKC7YDR144C 1791 nt4.89□□□□□ -1.63
TY1B-HO13535 TGL3YMR313C 1929 nt4.89□□□□□ -1.63
TY1B-HO13535 VBA2YBR293W 1425 nt4.88□□□□□ -1.63
TY1B-HO13535 CAF120YNL278W 3183 nt4.88□□□□□ -1.63
TY1B-HO13535 YME2YMR302C 2553 nt4.88□□□□□ -1.63
TY1B-HO13535 PSE1YMR308C 3270 nt4.88□□□□□ -1.63
TY1B-HO13535 RRN7YJL025W 1545 nt4.88□□□□□ -1.63
TY1B-HO13535 YLH47YPR125W 1365 nt4.88□□□□□ -1.63
TY1B-HO13535 CIT3YPR001W 1461 nt4.88□□□□□ -1.63
TY1B-HO13535 PCI8YIL071C 1335 nt4.88□□□□□ -1.63
TY1B-HO13535 ACC1YNR016C 6702 nt4.88□□□□□ -1.63
TY1B-HO13535 OXR1YPL196W 822 nt4.88□□□□□ -1.63
TY1B-HO13535 SUI3YPL237W 858 nt4.88□□□□□ -1.63
TY1B-HO13535 UBP5YER144C 2418 nt4.88□□□□□ -1.63
TY1B-HO13535 TAF7YMR227C 1773 nt4.87□□□□□ -1.63
TY1B-HO13535 TLG1YDR468C 675 nt4.87□□□□□ -1.63
TY1B-HO13535 GYP6YJL044C 1377 nt4.87□□□□□ -1.63
TY1B-HO13535 TMN2YDR107C 2019 nt4.87□□□□□ -1.63
TY1B-HO13535 ENT3YJR125C 1227 nt4.86□□□□□ -1.63
TY1B-HO13535 COX17YLL009C 210 nt4.86□□□□□ -1.63
TY1B-HO13535 PRE8YML092C 753 nt4.86□□□□□ -1.63
TY1B-HO13535 GPI12YMR281W 915 nt4.86□□□□□ -1.63
TY1B-HO13535 FMP30YPL103C 1407 nt4.85□□□□□ -1.63
TY1B-HO13535 RPB2YOR151C 3675 nt4.85□□□□□ -1.63
TY1B-HO13535 RTK1YDL025C 1863 nt4.85□□□□□ -1.63
TY1B-HO13535 HCA4YJL033W 2313 nt4.85□□□□□ -1.63
TY1B-HO13535 NFT1YKR103W 3657 nt4.84□□□□□ -1.63
TY1B-HO13535 YDR396WYDR396W 501 nt4.84□□□□□ -1.63
TY1B-HO13535 LPP1YDR503C 825 nt4.84□□□□□ -1.63
TY1B-HO13535 NCE103YNL036W 666 nt4.84□□□□□ -1.63
TY1B-HO13535 KRE5YOR336W 4098 nt4.84□□□□□ -1.63
TY1B-HO13535 MTR4YJL050W 3222 nt4.84□□□□□ -1.63
TY1B-HO13535 DEG1YFL001W 1329 nt4.84□□□□□ -1.63
TY1B-HO13535 NMD2YHR077C 3270 nt4.84□□□□□ -1.63
TY1B-HO13535 GSC2YGR032W 5688 nt4.84□□□□□ -1.64
TY1B-HO13535 IFM1YOL023W 2031 nt4.83□□□□□ -1.64
TY1B-HO13535 YLR339CYLR339C 552 nt4.83□□□□□ -1.64
TY1B-HO13535 TIR2YOR010C 756 nt4.83□□□□□ -1.64
TY1B-HO13535 YKR023WYKR023W 1593 nt4.83□□□□□ -1.64
TY1B-HO13535 CLD1YGR110W 1338 nt4.83□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 28.9 ms