RNA–Protein interactions for RNA: YMR037C

MSN2, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN2, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN2YMR037C DRS1P32892 752 aaKnown RBP12.08□□□□□ -0.48
MSN2YMR037C TFA1P36100 482 aa11.43□□□□□ -0.58
MSN2YMR037C RQC2Q12532 1038 aaKnown RBP11.28□□□□□ -0.6
MSN2YMR037C BFR2Q06631 534 aaKnown RBP11.1□□□□□ -0.63
MSN2YMR037C TAF7Q05021 590 aa10.94□□□□□ -0.66
MSN2YMR037C MTC1P47018 478 aaKnown RBP10.57□□□□□ -0.72
MSN2YMR037C AVT3P36062 692 aa10.05□□□□□ -0.8
MSN2YMR037C DMA1P38823 416 aa9.97□□□□□ -0.81
MSN2YMR037C LEO1P38439 464 aa9.92□□□□□ -0.82
MSN2YMR037C DIP2Q12220 943 aaPredicted RBP9.79□□□□□ -0.84
MSN2YMR037C LEU3P08638 886 aa9.26□□□□□ -0.93
MSN2YMR037C AIM44Q99299 758 aa9.19□□□□□ -0.94
MSN2YMR037C NAP1P25293 417 aaKnown RBP9.11□□□□□ -0.95
MSN2YMR037C PTP3P40048 928 aa9.05□□□□□ -0.96
MSN2YMR037C DMA2P53924 522 aa9.05□□□□□ -0.96
MSN2YMR037C IFH1P39520 1085 aa9.01□□□□□ -0.97
MSN2YMR037C SAS10Q12136 610 aaPredicted RBP8.98□□□□□ -0.97
MSN2YMR037C IOC4Q04213 475 aa8.96□□□□□ -0.97
MSN2YMR037C RLF2Q12495 606 aa8.96□□□□□ -0.97
MSN2YMR037C URN1Q06525 465 aaKnown RBP8.94□□□□□ -0.98
MSN2YMR037C ABP1P15891 592 aaKnown RBP8.89□□□□□ -0.99
MSN2YMR037C RPN1P38764 993 aaKnown RBP8.88□□□□□ -0.99
MSN2YMR037C RSE1Q04693 1361 aaKnown RBP8.84□□□□□ -0.99
MSN2YMR037C ORC1P54784 914 aaPredicted RBP8.79□□□□□ -1
MSN2YMR037C SSP1P38871 571 aa8.71□□□□□ -1.02
MSN2YMR037C CKB1P43639 278 aa8.65□□□□□ -1.02
MSN2YMR037C YRB30P53107 440 aaPredicted RBP8.62□□□□□ -1.03
MSN2YMR037C YML020WQ03722 664 aa8.56□□□□□ -1.04
MSN2YMR037C TOP1P04786 769 aa8.55□□□□□ -1.04
MSN2YMR037C NOP8Q08287 484 aaPredicted RBP8.48□□□□□ -1.05
MSN2YMR037C FAP1P53971 965 aa8.48□□□□□ -1.05
MSN2YMR037C SNU71P53207 620 aaKnown RBP8.44□□□□□ -1.06
MSN2YMR037C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.44□□□□□ -1.06not detected
MSN2YMR037C SPB4P25808 606 aaPredicted RBP8.44□□□□□ -1.06
MSN2YMR037C HGH1P48362 394 aaKnown RBP8.43□□□□□ -1.06
MSN2YMR037C NOP7P53261 605 aaKnown RBP8.42□□□□□ -1.06
MSN2YMR037C RPL17AP05740 184 aaKnown RBP8.41□□□□□ -1.06
MSN2YMR037C RIM101P33400 625 aa8.41□□□□□ -1.06
MSN2YMR037C RPL17BP46990 184 aaKnown RBP8.41□□□□□ -1.06
MSN2YMR037C SLX8P40072 274 aa8.39□□□□□ -1.07
MSN2YMR037C BRL1P38770 471 aa8.35□□□□□ -1.07
MSN2YMR037C KIN1P13185 1064 aa8.3□□□□□ -1.08
MSN2YMR037C SSA1P10591 642 aaKnown RBP8.3□□□□□ -1.08
MSN2YMR037C GEF1P37020 779 aa8.3□□□□□ -1.08
MSN2YMR037C ISW2Q08773 1120 aa8.28□□□□□ -1.08
MSN2YMR037C YAH1Q12184 172 aaKnown RBP8.28□□□□□ -1.08
MSN2YMR037C MGA2P40578 1113 aa8.24□□□□□ -1.09
MSN2YMR037C YLR271WQ06152 274 aa8.23□□□□□ -1.09
MSN2YMR037C SPT21P35209 758 aa8.21□□□□□ -1.09
MSN2YMR037C VPS70P47161 811 aa8.2□□□□□ -1.1
MSN2YMR037C YNR021WP53723 404 aaKnown RBP8.2□□□□□ -1.1
MSN2YMR037C OXP1P28273 1286 aa8.2□□□□□ -1.1
MSN2YMR037C NUG1P40010 520 aaKnown RBP8.2□□□□□ -1.1
MSN2YMR037C REB1P21538 810 aa8.19□□□□□ -1.1
MSN2YMR037C BRN1P38170 754 aa8.19□□□□□ -1.1
MSN2YMR037C MET10P39692 1035 aa8.19□□□□□ -1.1
MSN2YMR037C MRX12P47084 519 aa8.19□□□□□ -1.1
MSN2YMR037C YPR148CQ06523 435 aa8.18□□□□□ -1.1
MSN2YMR037C SUB1P54000 292 aaKnown RBP8.17□□□□□ -1.1
MSN2YMR037C SLD2P34252 453 aa8.16□□□□□ -1.1
MSN2YMR037C SUB2Q07478 446 aaKnown RBP8.16□□□□□ -1.1
MSN2YMR037C DSF2P38213 736 aa8.15□□□□□ -1.11
MSN2YMR037C MAM3Q12296 706 aa8.15□□□□□ -1.11
MSN2YMR037C ASF1P32447 279 aa8.14□□□□□ -1.11
MSN2YMR037C YTA7P40340 1379 aa8.14□□□□□ -1.11
MSN2YMR037C SWE1P32944 819 aa8.14□□□□□ -1.11
MSN2YMR037C AIM7Q12156 149 aa8.13□□□□□ -1.11
MSN2YMR037C PAM1P37304 830 aaKnown RBP8.12□□□□□ -1.11
MSN2YMR037C SET1P38827 1080 aaKnown RBP8.12□□□□□ -1.11
MSN2YMR037C VPS72Q03388 795 aa8.12□□□□□ -1.11
MSN2YMR037C RPG1P38249 964 aaKnown RBP8.11□□□□□ -1.11
MSN2YMR037C RTS3P53289 263 aa8.11□□□□□ -1.11
MSN2YMR037C FAR11P53917 953 aa8.11□□□□□ -1.11
MSN2YMR037C DOS2P54858 310 aa8.11□□□□□ -1.11
MSN2YMR037C YIL055CP40523 627 aaKnown RBP8.1□□□□□ -1.11
MSN2YMR037C ATG36P46983 293 aa8.09□□□□□ -1.11
MSN2YMR037C GLC3P32775 704 aa8.09□□□□□ -1.11
MSN2YMR037C SPC42P36094 363 aa8.09□□□□□ -1.11
MSN2YMR037C GUA1P38625 525 aaKnown RBP8.09□□□□□ -1.11
MSN2YMR037C LAM6Q08001 693 aa8.06□□□□□ -1.12
MSN2YMR037C PBS2P08018 668 aa8.05□□□□□ -1.12
MSN2YMR037C CST9Q06032 482 aa8.05□□□□□ -1.12
MSN2YMR037C GIN4Q12263 1142 aa8.05□□□□□ -1.12
MSN2YMR037C RRN6P32786 894 aa8.04□□□□□ -1.12
MSN2YMR037C MNN4P36044 1178 aa8.04□□□□□ -1.12
MSN2YMR037C HPC2Q01448 625 aa8.03□□□□□ -1.12
MSN2YMR037C MDG1P53885 366 aa8.03□□□□□ -1.12
MSN2YMR037C PRY3P47033 881 aa8.01□□□□□ -1.13
MSN2YMR037C YJR008WP47085 338 aa8.01□□□□□ -1.13
MSN2YMR037C OSW7P43611 510 aa8□□□□□ -1.13
MSN2YMR037C HEM3P28789 327 aa7.99□□□□□ -1.13
MSN2YMR037C SSA4P22202 642 aaKnown RBP7.99□□□□□ -1.13
MSN2YMR037C OCA5P38738 679 aa7.98□□□□□ -1.13
MSN2YMR037C TFB3Q03290 321 aa7.98□□□□□ -1.13
MSN2YMR037C SSF1P38789 453 aaPredicted RBP7.97□□□□□ -1.13
MSN2YMR037C MAK21Q12176 1025 aaKnown RBP7.96□□□□□ -1.14
MSN2YMR037C RAM2P29703 316 aa7.95□□□□□ -1.14
MSN2YMR037C RSM7P47150 247 aa7.95□□□□□ -1.14
MSN2YMR037C FPR4Q06205 392 aaPredicted RBP7.95□□□□□ -1.14
MSN2YMR037C KRI1P42846 591 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms