RNA–Protein interactions for RNA: YGR110W

CLD1, Transcript of Mitochondrial cardiolipin-specific phospholipase, yeastyeast

Gene CLD1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLD1YGR110W DRS1P32892 752 aaKnown RBP15.91■□□□□ 0.14
CLD1YGR110W MTC1P47018 478 aaKnown RBP15.43■□□□□ 0.06
CLD1YGR110W BFR2Q06631 534 aaKnown RBP13.91□□□□□ -0.18
CLD1YGR110W DIP2Q12220 943 aaPredicted RBP13.41□□□□□ -0.26
CLD1YGR110W TFA1P36100 482 aa13.37□□□□□ -0.27
CLD1YGR110W AVT3P36062 692 aa13.35□□□□□ -0.27
CLD1YGR110W FAP1P53971 965 aa12.89□□□□□ -0.35
CLD1YGR110W RSE1Q04693 1361 aaKnown RBP12.52□□□□□ -0.41
CLD1YGR110W ISW2Q08773 1120 aa12.4□□□□□ -0.42
CLD1YGR110W RPG1P38249 964 aaKnown RBP12.32□□□□□ -0.44
CLD1YGR110W PRI1P10363 409 aa12.17□□□□□ -0.46
CLD1YGR110W PRY3P47033 881 aa12.08□□□□□ -0.48
CLD1YGR110W RPL17AP05740 184 aaKnown RBP12.07□□□□□ -0.48
CLD1YGR110W RPL17BP46990 184 aaKnown RBP12.07□□□□□ -0.48
CLD1YGR110W AAD16Q02895 342 aa12.06□□□□□ -0.48
CLD1YGR110W REB1P21538 810 aa11.84□□□□□ -0.51
CLD1YGR110W SPT21P35209 758 aa11.64□□□□□ -0.55
CLD1YGR110W TSR3Q12094 313 aaKnown RBP11.63□□□□□ -0.55
CLD1YGR110W RIM101P33400 625 aa11.59□□□□□ -0.55
CLD1YGR110W RQC2Q12532 1038 aaKnown RBP11.58□□□□□ -0.56
CLD1YGR110W PTP3P40048 928 aa11.45□□□□□ -0.58
CLD1YGR110W HAA1Q12753 694 aaKnown RBP11.36□□□□□ -0.59
CLD1YGR110W OXP1P28273 1286 aa11.29□□□□□ -0.6
CLD1YGR110W YCK3P39962 524 aa11.26□□□□□ -0.61
CLD1YGR110W YKR023WP36119 530 aaKnown RBP11.22□□□□□ -0.61
CLD1YGR110W SSP1P38871 571 aa11.22□□□□□ -0.61
CLD1YGR110W DMA1P38823 416 aa11.21□□□□□ -0.61
CLD1YGR110W YAH1Q12184 172 aaKnown RBP11.14□□□□□ -0.63
CLD1YGR110W MRPL32P25348 183 aa11.1□□□□□ -0.63
CLD1YGR110W YIL055CP40523 627 aaKnown RBP11.04□□□□□ -0.64
CLD1YGR110W YLR271WQ06152 274 aa11.02□□□□□ -0.65
CLD1YGR110W HOP09932 586 aa11□□□□□ -0.65
CLD1YGR110W TFC8Q12308 588 aa10.96□□□□□ -0.65
CLD1YGR110W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.94□□□□□ -0.66not detected
CLD1YGR110W DCD1P06773 312 aa10.93□□□□□ -0.66
CLD1YGR110W CDC27P38042 758 aa10.89□□□□□ -0.67
CLD1YGR110W RSM7P47150 247 aa10.88□□□□□ -0.67
CLD1YGR110W MGA2P40578 1113 aa10.76□□□□□ -0.69
CLD1YGR110W CST9Q06032 482 aa10.72□□□□□ -0.69
CLD1YGR110W AI2P03876 854 aa10.67□□□□□ -0.7
CLD1YGR110W BCH2P36122 765 aa10.67□□□□□ -0.7
CLD1YGR110W PSD2P53037 1138 aaKnown RBP10.64□□□□□ -0.71
CLD1YGR110W YGL015CP33199 130 aa10.58□□□□□ -0.71
CLD1YGR110W BBC1P47068 1157 aa10.51□□□□□ -0.73
CLD1YGR110W EPS1P40557 701 aa10.5□□□□□ -0.73
CLD1YGR110W SAS10Q12136 610 aaPredicted RBP10.43□□□□□ -0.74
CLD1YGR110W BDF1P35817 686 aa10.42□□□□□ -0.74
CLD1YGR110W SCY1P53009 804 aa10.4□□□□□ -0.74
CLD1YGR110W MRM1P25270 412 aa10.38□□□□□ -0.75
CLD1YGR110W RAM2P29703 316 aa10.36□□□□□ -0.75
CLD1YGR110W MAP2P38174 421 aaKnown RBP10.36□□□□□ -0.75
CLD1YGR110W RCR1P38212 213 aa10.33□□□□□ -0.76
CLD1YGR110W LEO1P38439 464 aa10.29□□□□□ -0.76
CLD1YGR110W UBP10P53874 792 aaPredicted RBP10.27□□□□□ -0.77
CLD1YGR110W RTG3P38165 486 aa10.23□□□□□ -0.77
CLD1YGR110W SET1P38827 1080 aaKnown RBP10.19□□□□□ -0.78
CLD1YGR110W LEU3P08638 886 aa10.17□□□□□ -0.78
CLD1YGR110W VPS29P38759 282 aa10.14□□□□□ -0.79
CLD1YGR110W SLX5P32828 619 aaKnown RBP10.13□□□□□ -0.79
CLD1YGR110W TAF7Q05021 590 aa10.13□□□□□ -0.79
CLD1YGR110W MAK11P20484 414 aaKnown RBP10.08□□□□□ -0.8
CLD1YGR110W VPS70P47161 811 aa10.07□□□□□ -0.8
CLD1YGR110W YPR148CQ06523 435 aa10.06□□□□□ -0.8
CLD1YGR110W SPB4P25808 606 aaPredicted RBP9.99□□□□□ -0.81
CLD1YGR110W COQ8P27697 501 aa9.99□□□□□ -0.81
CLD1YGR110W STS1P38637 319 aa9.97□□□□□ -0.81
CLD1YGR110W CKB1P43639 278 aa9.97□□□□□ -0.81
CLD1YGR110W YMR1P47147 688 aaKnown RBP RIP-Chip data9.97□□□□□ -0.81not detected
CLD1YGR110W YFR006WP43590 535 aa9.96□□□□□ -0.82
CLD1YGR110W IFH1P39520 1085 aa9.95□□□□□ -0.82
CLD1YGR110W DBP1P24784 617 aaKnown RBP9.93□□□□□ -0.82
CLD1YGR110W MIF2P35201 549 aa9.9□□□□□ -0.82
CLD1YGR110W EDS1P38073 919 aa9.9□□□□□ -0.82
CLD1YGR110W RPN1P38764 993 aaKnown RBP9.89□□□□□ -0.83
CLD1YGR110W YOR238WQ08634 303 aa9.87□□□□□ -0.83
CLD1YGR110W TIF4632P39936 914 aaKnown RBP9.86□□□□□ -0.83
CLD1YGR110W PBS2P08018 668 aa9.82□□□□□ -0.84
CLD1YGR110W PIB1Q06651 286 aa9.82□□□□□ -0.84
CLD1YGR110W NOP53Q12080 455 aaKnown RBP9.82□□□□□ -0.84
CLD1YGR110W DSF2P38213 736 aa9.81□□□□□ -0.84
CLD1YGR110W PTC3P34221 468 aaKnown RBP9.78□□□□□ -0.84
CLD1YGR110W TGL3P40308 642 aa9.78□□□□□ -0.84
CLD1YGR110W NSR1P27476 414 aaKnown RBP RIP-Chip data9.75□□□□□ -0.85not detected
CLD1YGR110W YAP5P40574 245 aa9.75□□□□□ -0.85
CLD1YGR110W REF2P42073 533 aaPredicted RBP9.74□□□□□ -0.85
CLD1YGR110W DMA2P53924 522 aa9.74□□□□□ -0.85
CLD1YGR110W VMA1P17255 1071 aaKnown RBP9.69□□□□□ -0.86
CLD1YGR110W MAM3Q12296 706 aa9.66□□□□□ -0.86
CLD1YGR110W IES2P40154 320 aa9.64□□□□□ -0.87
CLD1YGR110W DIT2P21595 489 aa9.63□□□□□ -0.87
CLD1YGR110W YNR021WP53723 404 aaKnown RBP9.63□□□□□ -0.87
CLD1YGR110W NUP42P49686 430 aaKnown RBP9.62□□□□□ -0.87
CLD1YGR110W KIN1P13185 1064 aa9.6□□□□□ -0.87
CLD1YGR110W GLC3P32775 704 aa9.6□□□□□ -0.87
CLD1YGR110W COX6P00427 148 aa9.59□□□□□ -0.87
CLD1YGR110W VHR2P40041 505 aa9.58□□□□□ -0.88
CLD1YGR110W ATH1P48016 1211 aa9.58□□□□□ -0.88
CLD1YGR110W UBP14P38237 781 aaKnown RBP9.57□□□□□ -0.88
CLD1YGR110W GRE2Q12068 342 aaKnown RBP9.57□□□□□ -0.88
CLD1YGR110W SAM3Q08986 587 aa9.56□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms