RNA–Protein interactions for RNA: YJL192C

SOP4, Transcript of ER-membrane protein, yeastyeast

Gene SOP4, Length 705 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOP4YJL192C MTC1P47018 478 aaKnown RBP12.81□□□□□ -0.36
SOP4YJL192C DRS1P32892 752 aaKnown RBP12.21□□□□□ -0.45
SOP4YJL192C FAP1P53971 965 aa12□□□□□ -0.49
SOP4YJL192C PRY3P47033 881 aa11.34□□□□□ -0.59
SOP4YJL192C AAD16Q02895 342 aa10.85□□□□□ -0.67
SOP4YJL192C YCK3P39962 524 aa10.82□□□□□ -0.68
SOP4YJL192C PRI1P10363 409 aa10.81□□□□□ -0.68
SOP4YJL192C DIP2Q12220 943 aaPredicted RBP10.59□□□□□ -0.71
SOP4YJL192C HAA1Q12753 694 aaKnown RBP10.55□□□□□ -0.72
SOP4YJL192C ISW2Q08773 1120 aa10.54□□□□□ -0.72
SOP4YJL192C RPG1P38249 964 aaKnown RBP10.46□□□□□ -0.73
SOP4YJL192C AVT3P36062 692 aa10.26□□□□□ -0.77
SOP4YJL192C BFR2Q06631 534 aaKnown RBP10.24□□□□□ -0.77
SOP4YJL192C TSR3Q12094 313 aaKnown RBP10.2□□□□□ -0.78
SOP4YJL192C RSE1Q04693 1361 aaKnown RBP10.16□□□□□ -0.78
SOP4YJL192C RPL17AP05740 184 aaKnown RBP9.87□□□□□ -0.83
SOP4YJL192C RPL17BP46990 184 aaKnown RBP9.87□□□□□ -0.83
SOP4YJL192C REB1P21538 810 aa9.8□□□□□ -0.84
SOP4YJL192C MRPL32P25348 183 aa9.72□□□□□ -0.85
SOP4YJL192C YGL015CP33199 130 aa9.58□□□□□ -0.88
SOP4YJL192C SPT21P35209 758 aa9.46□□□□□ -0.9
SOP4YJL192C YKR023WP36119 530 aaKnown RBP9.3□□□□□ -0.92
SOP4YJL192C CDC27P38042 758 aa9.3□□□□□ -0.92
SOP4YJL192C BUD31P25337 157 aaPredicted RBP9.23□□□□□ -0.93
SOP4YJL192C DCD1P06773 312 aa9.15□□□□□ -0.94
SOP4YJL192C HOP09932 586 aa9.15□□□□□ -0.94
SOP4YJL192C RIM101P33400 625 aa9.13□□□□□ -0.95
SOP4YJL192C TFA1P36100 482 aa9.1□□□□□ -0.95
SOP4YJL192C TFC8Q12308 588 aa9.1□□□□□ -0.95
SOP4YJL192C MAP2P38174 421 aaKnown RBP8.98□□□□□ -0.97
SOP4YJL192C UBP10P53874 792 aaPredicted RBP8.93□□□□□ -0.98
SOP4YJL192C OXP1P28273 1286 aa8.87□□□□□ -0.99
SOP4YJL192C SCY1P53009 804 aa8.84□□□□□ -0.99
SOP4YJL192C BCH2P36122 765 aa8.82□□□□□ -1
SOP4YJL192C PTP3P40048 928 aa8.74□□□□□ -1.01
SOP4YJL192C YIL055CP40523 627 aaKnown RBP8.7□□□□□ -1.02
SOP4YJL192C YAH1Q12184 172 aaKnown RBP8.69□□□□□ -1.02
SOP4YJL192C SIS1P25294 352 aaKnown RBP8.67□□□□□ -1.02
SOP4YJL192C SLX5P32828 619 aaKnown RBP8.67□□□□□ -1.02
SOP4YJL192C EPS1P40557 701 aa8.62□□□□□ -1.03
SOP4YJL192C BDF1P35817 686 aa8.57□□□□□ -1.04
SOP4YJL192C RSM7P47150 247 aa8.57□□□□□ -1.04
SOP4YJL192C TGL3P40308 642 aa8.56□□□□□ -1.04
SOP4YJL192C TIF4632P39936 914 aaKnown RBP8.54□□□□□ -1.04
SOP4YJL192C UBP9P39967 754 aa8.53□□□□□ -1.04
SOP4YJL192C AI2P03876 854 aa8.5□□□□□ -1.05
SOP4YJL192C YLR271WQ06152 274 aa8.5□□□□□ -1.05
SOP4YJL192C BBC1P47068 1157 aa8.46□□□□□ -1.06
SOP4YJL192C SSP1P38871 571 aa8.42□□□□□ -1.06
SOP4YJL192C PSD2P53037 1138 aaKnown RBP8.34□□□□□ -1.07
SOP4YJL192C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.32□□□□□ -1.08not detected
SOP4YJL192C CST9Q06032 482 aa8.25□□□□□ -1.09
SOP4YJL192C MRM1P25270 412 aa8.23□□□□□ -1.09
SOP4YJL192C MGA2P40578 1113 aa8.18□□□□□ -1.1
SOP4YJL192C NSR1P27476 414 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1 RIP-Chip
SOP4YJL192C YOR238WQ08634 303 aa8.17□□□□□ -1.1
SOP4YJL192C YAP5P40574 245 aa8.15□□□□□ -1.1
SOP4YJL192C YBL029C-AQ3E756 94 aa8.15□□□□□ -1.1
SOP4YJL192C MST1P07236 462 aa8.14□□□□□ -1.11
SOP4YJL192C PIB1Q06651 286 aa8.1□□□□□ -1.11
SOP4YJL192C RCR1P38212 213 aa8.05□□□□□ -1.12
SOP4YJL192C RTG3P38165 486 aa8.01□□□□□ -1.13
SOP4YJL192C VPS29P38759 282 aa8.01□□□□□ -1.13
SOP4YJL192C WSC3Q12215 556 aa8.01□□□□□ -1.13
SOP4YJL192C VNX1P42839 908 aa8□□□□□ -1.13
SOP4YJL192C GTT3P39996 337 aa7.99□□□□□ -1.13
SOP4YJL192C YFR006WP43590 535 aa7.98□□□□□ -1.13
SOP4YJL192C STS1P38637 319 aa7.96□□□□□ -1.14
SOP4YJL192C YMR1P47147 688 aaKnown RBP RIP-Chip data7.96□□□□□ -1.14not detected
SOP4YJL192C DBP1P24784 617 aaKnown RBP7.95□□□□□ -1.14
SOP4YJL192C SPP1Q03012 353 aa7.9□□□□□ -1.14
SOP4YJL192C AIR2Q12476 344 aaKnown RBP7.87□□□□□ -1.15
SOP4YJL192C VMA1P17255 1071 aaKnown RBP7.84□□□□□ -1.15
SOP4YJL192C RAM2P29703 316 aa7.82□□□□□ -1.16
SOP4YJL192C TIF11P38912 153 aaKnown RBP7.82□□□□□ -1.16
SOP4YJL192C SET4P42948 560 aa7.82□□□□□ -1.16
SOP4YJL192C YOL036WQ08206 761 aa7.81□□□□□ -1.16
SOP4YJL192C FKH1P40466 484 aa7.8□□□□□ -1.16
SOP4YJL192C ULI1P43604 169 aa7.76□□□□□ -1.17
SOP4YJL192C YJL171CP46992 396 aa7.76□□□□□ -1.17
SOP4YJL192C MSB4Q12317 492 aa7.75□□□□□ -1.17
SOP4YJL192C LDB19Q12502 818 aa7.74□□□□□ -1.17
SOP4YJL192C SAM3Q08986 587 aa7.73□□□□□ -1.17
SOP4YJL192C MAK11P20484 414 aaKnown RBP7.72□□□□□ -1.17
SOP4YJL192C IOC2Q12072 812 aa7.72□□□□□ -1.17
SOP4YJL192C MIF2P35201 549 aa7.7□□□□□ -1.18
SOP4YJL192C TRP5P00931 707 aaKnown RBP7.69□□□□□ -1.18
SOP4YJL192C EAP1P36041 632 aaKnown RBP7.67□□□□□ -1.18
SOP4YJL192C EDS1P38073 919 aa7.67□□□□□ -1.18
SOP4YJL192C GYP5Q12344 894 aa7.67□□□□□ -1.18
SOP4YJL192C COQ8P27697 501 aa7.64□□□□□ -1.19
SOP4YJL192C DCW1P36091 449 aa7.64□□□□□ -1.19
SOP4YJL192C RTG1P32607 177 aa7.61□□□□□ -1.19
SOP4YJL192C BMT6Q12291 365 aa7.61□□□□□ -1.19
SOP4YJL192C PTC3P34221 468 aaKnown RBP7.6□□□□□ -1.19
SOP4YJL192C GRE2Q12068 342 aaKnown RBP7.59□□□□□ -1.19
SOP4YJL192C HTA1P04911 132 aaKnown RBP7.58□□□□□ -1.2
SOP4YJL192C HTA2P04912 132 aa7.58□□□□□ -1.2
SOP4YJL192C ABP1P15891 592 aaKnown RBP7.57□□□□□ -1.2
SOP4YJL192C YNL035CP53962 389 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms