Protein–RNA interactions for Protein: Q9UNN4

GTF2A1L, TFIIA-alpha and beta-like factor, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1LQ9UNN4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF2A1LQ9UNN4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF2A1LQ9UNN4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF2A1LQ9UNN4 AC138932.1-201ENST00000534164 6830 ntBASIC19.65■□□□□ 0.74
GTF2A1LQ9UNN4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
GTF2A1LQ9UNN4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GTF2A1LQ9UNN4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GTF2A1LQ9UNN4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.64■□□□□ 0.73
GTF2A1LQ9UNN4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.64■□□□□ 0.73
GTF2A1LQ9UNN4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.64■□□□□ 0.73
GTF2A1LQ9UNN4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GTF2A1LQ9UNN4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.64■□□□□ 0.73
GTF2A1LQ9UNN4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GTF2A1LQ9UNN4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.64■□□□□ 0.73
GTF2A1LQ9UNN4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GTF2A1LQ9UNN4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2A1LQ9UNN4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2A1LQ9UNN4 LINC00565-201ENST00000562710 2331 ntBASIC19.63■□□□□ 0.73
GTF2A1LQ9UNN4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2A1LQ9UNN4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
GTF2A1LQ9UNN4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2A1LQ9UNN4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2A1LQ9UNN4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
GTF2A1LQ9UNN4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.63■□□□□ 0.73
GTF2A1LQ9UNN4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.63■□□□□ 0.73
GTF2A1LQ9UNN4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.63■□□□□ 0.73
GTF2A1LQ9UNN4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.63■□□□□ 0.73
GTF2A1LQ9UNN4 AL353803.4-201ENST00000565882 1934 ntBASIC19.63■□□□□ 0.73
GTF2A1LQ9UNN4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.62■□□□□ 0.73
GTF2A1LQ9UNN4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
GTF2A1LQ9UNN4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A1LQ9UNN4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.62■□□□□ 0.73
GTF2A1LQ9UNN4 YBX1P4-201ENST00000392794 808 ntBASIC19.62■□□□□ 0.73
GTF2A1LQ9UNN4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.62■□□□□ 0.73
GTF2A1LQ9UNN4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.62■□□□□ 0.73
GTF2A1LQ9UNN4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A1LQ9UNN4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A1LQ9UNN4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A1LQ9UNN4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.62■□□□□ 0.73
GTF2A1LQ9UNN4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A1LQ9UNN4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A1LQ9UNN4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1LQ9UNN4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1LQ9UNN4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1LQ9UNN4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1LQ9UNN4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1LQ9UNN4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1LQ9UNN4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1LQ9UNN4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1LQ9UNN4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.61■□□□□ 0.73
GTF2A1LQ9UNN4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.61■□□□□ 0.73
GTF2A1LQ9UNN4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.61■□□□□ 0.73
GTF2A1LQ9UNN4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1LQ9UNN4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
GTF2A1LQ9UNN4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1LQ9UNN4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1LQ9UNN4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.61■□□□□ 0.73
GTF2A1LQ9UNN4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1LQ9UNN4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 MIR4508-201ENST00000584178 70 ntBASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 LINC00526-201ENST00000581067 1875 ntBASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1LQ9UNN4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1LQ9UNN4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1LQ9UNN4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.59■□□□□ 0.73
GTF2A1LQ9UNN4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
GTF2A1LQ9UNN4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.59■□□□□ 0.73
GTF2A1LQ9UNN4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.59■□□□□ 0.73
GTF2A1LQ9UNN4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.59■□□□□ 0.73
GTF2A1LQ9UNN4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
GTF2A1LQ9UNN4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.59■□□□□ 0.73
GTF2A1LQ9UNN4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GTF2A1LQ9UNN4 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.58■□□□□ 0.73
GTF2A1LQ9UNN4 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.58■□□□□ 0.73
GTF2A1LQ9UNN4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GTF2A1LQ9UNN4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GTF2A1LQ9UNN4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GTF2A1LQ9UNN4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
GTF2A1LQ9UNN4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GTF2A1LQ9UNN4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
GTF2A1LQ9UNN4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.58■□□□□ 0.72
GTF2A1LQ9UNN4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GTF2A1LQ9UNN4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GTF2A1LQ9UNN4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GTF2A1LQ9UNN4 CLDN5-201ENST00000403084 2357 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms