Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC30.46■■■□□ 2.47
KRT28Q7Z3Y7 TMEM191A-211ENST00000637163 1067 ntBASIC30.46■■■□□ 2.47
KRT28Q7Z3Y7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
KRT28Q7Z3Y7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
KRT28Q7Z3Y7 LINC01529-204ENST00000636474 1715 ntBASIC30.45■■■□□ 2.47
KRT28Q7Z3Y7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
KRT28Q7Z3Y7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC30.45■■■□□ 2.47
KRT28Q7Z3Y7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
KRT28Q7Z3Y7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC30.45■■■□□ 2.47
KRT28Q7Z3Y7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
KRT28Q7Z3Y7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
KRT28Q7Z3Y7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
KRT28Q7Z3Y7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
KRT28Q7Z3Y7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
KRT28Q7Z3Y7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
KRT28Q7Z3Y7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
KRT28Q7Z3Y7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
KRT28Q7Z3Y7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC30.44■■■□□ 2.46
KRT28Q7Z3Y7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC30.44■■■□□ 2.46
KRT28Q7Z3Y7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
KRT28Q7Z3Y7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
KRT28Q7Z3Y7 AC145676.1-201ENST00000514988 2004 ntBASIC30.44■■■□□ 2.46
KRT28Q7Z3Y7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
KRT28Q7Z3Y7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
KRT28Q7Z3Y7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC30.43■■■□□ 2.46
KRT28Q7Z3Y7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
KRT28Q7Z3Y7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
KRT28Q7Z3Y7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC30.43■■■□□ 2.46
KRT28Q7Z3Y7 AC144652.1-201ENST00000609974 1624 ntBASIC30.43■■■□□ 2.46
KRT28Q7Z3Y7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.42■■■□□ 2.46
KRT28Q7Z3Y7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC30.42■■■□□ 2.46
KRT28Q7Z3Y7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC30.42■■■□□ 2.46
KRT28Q7Z3Y7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
KRT28Q7Z3Y7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
KRT28Q7Z3Y7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
KRT28Q7Z3Y7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
KRT28Q7Z3Y7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
KRT28Q7Z3Y7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
KRT28Q7Z3Y7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
KRT28Q7Z3Y7 KRT19P1-201ENST00000405746 1186 ntBASIC30.41■■■□□ 2.46
KRT28Q7Z3Y7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
KRT28Q7Z3Y7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC30.41■■■□□ 2.46
KRT28Q7Z3Y7 AC135731.1-201ENST00000569415 2548 ntBASIC30.41■■■□□ 2.46
KRT28Q7Z3Y7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC30.41■■■□□ 2.46
KRT28Q7Z3Y7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
KRT28Q7Z3Y7 BX005040.4-201ENST00000637145 1518 ntBASIC30.41■■■□□ 2.46
KRT28Q7Z3Y7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
KRT28Q7Z3Y7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC30.4■■■□□ 2.46
KRT28Q7Z3Y7 AC011767.1-201ENST00000617410 1153 ntBASIC30.4■■■□□ 2.46
KRT28Q7Z3Y7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
KRT28Q7Z3Y7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
KRT28Q7Z3Y7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
KRT28Q7Z3Y7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
KRT28Q7Z3Y7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC30.39■■■□□ 2.46
KRT28Q7Z3Y7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC30.39■■■□□ 2.46
KRT28Q7Z3Y7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.39■■■□□ 2.46
KRT28Q7Z3Y7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
KRT28Q7Z3Y7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
KRT28Q7Z3Y7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
KRT28Q7Z3Y7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
KRT28Q7Z3Y7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
KRT28Q7Z3Y7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC30.38■■■□□ 2.45
KRT28Q7Z3Y7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC30.38■■■□□ 2.45
KRT28Q7Z3Y7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
KRT28Q7Z3Y7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC30.37■■■□□ 2.45
KRT28Q7Z3Y7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.37■■■□□ 2.45
KRT28Q7Z3Y7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
KRT28Q7Z3Y7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
KRT28Q7Z3Y7 MIR663A-201ENST00000385250 93 ntBASIC30.37■■■□□ 2.45
KRT28Q7Z3Y7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
KRT28Q7Z3Y7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC30.37■■■□□ 2.45
KRT28Q7Z3Y7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC30.37■■■□□ 2.45
KRT28Q7Z3Y7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC30.37■■■□□ 2.45
KRT28Q7Z3Y7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
KRT28Q7Z3Y7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
KRT28Q7Z3Y7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
KRT28Q7Z3Y7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
KRT28Q7Z3Y7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
KRT28Q7Z3Y7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
KRT28Q7Z3Y7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
KRT28Q7Z3Y7 GPX1P1-201ENST00000388829 606 ntBASIC30.35■■■□□ 2.45
KRT28Q7Z3Y7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC30.35■■■□□ 2.45
KRT28Q7Z3Y7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC30.35■■■□□ 2.45
KRT28Q7Z3Y7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
KRT28Q7Z3Y7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
KRT28Q7Z3Y7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
KRT28Q7Z3Y7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC30.34■■■□□ 2.45
KRT28Q7Z3Y7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
KRT28Q7Z3Y7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
KRT28Q7Z3Y7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC30.34■■■□□ 2.45
KRT28Q7Z3Y7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
KRT28Q7Z3Y7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
KRT28Q7Z3Y7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
KRT28Q7Z3Y7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
KRT28Q7Z3Y7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
KRT28Q7Z3Y7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
KRT28Q7Z3Y7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC30.33■■■□□ 2.45
KRT28Q7Z3Y7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC30.33■■■□□ 2.45
KRT28Q7Z3Y7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC30.33■■■□□ 2.45
KRT28Q7Z3Y7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC30.33■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms