Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TBC1D3FA6NER0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TBC1D3FA6NER0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TBC1D3FA6NER0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.12■■□□□ 1.13
TBC1D3FA6NER0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TBC1D3FA6NER0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.12■■□□□ 1.13
TBC1D3FA6NER0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TBC1D3FA6NER0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TBC1D3FA6NER0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.12■■□□□ 1.13
TBC1D3FA6NER0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TBC1D3FA6NER0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.11■■□□□ 1.13
TBC1D3FA6NER0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D3FA6NER0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
TBC1D3FA6NER0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D3FA6NER0 AC027612.3-201ENST00000413684 1047 ntBASIC22.11■■□□□ 1.13
TBC1D3FA6NER0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.11■■□□□ 1.13
TBC1D3FA6NER0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D3FA6NER0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D3FA6NER0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D3FA6NER0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D3FA6NER0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D3FA6NER0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D3FA6NER0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
TBC1D3FA6NER0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D3FA6NER0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.1■■□□□ 1.13
TBC1D3FA6NER0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D3FA6NER0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.1■■□□□ 1.13
TBC1D3FA6NER0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.1■■□□□ 1.13
TBC1D3FA6NER0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D3FA6NER0 AL353803.4-201ENST00000565882 1934 ntBASIC22.1■■□□□ 1.13
TBC1D3FA6NER0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3FA6NER0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3FA6NER0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3FA6NER0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
TBC1D3FA6NER0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.09■■□□□ 1.13
TBC1D3FA6NER0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.09■■□□□ 1.13
TBC1D3FA6NER0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.09■■□□□ 1.13
TBC1D3FA6NER0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.09■■□□□ 1.13
TBC1D3FA6NER0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.09■■□□□ 1.13
TBC1D3FA6NER0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3FA6NER0 AL031602.1-201ENST00000633169 911 ntBASIC22.09■■□□□ 1.13
TBC1D3FA6NER0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3FA6NER0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
TBC1D3FA6NER0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3FA6NER0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3FA6NER0 AC004687.1-201ENST00000579003 1625 ntBASIC22.09■■□□□ 1.13
TBC1D3FA6NER0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3FA6NER0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3FA6NER0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.08■■□□□ 1.13
TBC1D3FA6NER0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TBC1D3FA6NER0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TBC1D3FA6NER0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TBC1D3FA6NER0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
TBC1D3FA6NER0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
TBC1D3FA6NER0 AC123595.1-201ENST00000440769 1046 ntBASIC22.08■■□□□ 1.13
TBC1D3FA6NER0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TBC1D3FA6NER0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.08■■□□□ 1.13
TBC1D3FA6NER0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.08■■□□□ 1.13
TBC1D3FA6NER0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
TBC1D3FA6NER0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
TBC1D3FA6NER0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
TBC1D3FA6NER0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3FA6NER0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3FA6NER0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
TBC1D3FA6NER0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.07■■□□□ 1.12
TBC1D3FA6NER0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3FA6NER0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3FA6NER0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.07■■□□□ 1.12
TBC1D3FA6NER0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3FA6NER0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3FA6NER0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3FA6NER0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.06■■□□□ 1.12
TBC1D3FA6NER0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.06■■□□□ 1.12
TBC1D3FA6NER0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3FA6NER0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3FA6NER0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3FA6NER0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.06■■□□□ 1.12
TBC1D3FA6NER0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
TBC1D3FA6NER0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
TBC1D3FA6NER0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3FA6NER0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.05■■□□□ 1.12
TBC1D3FA6NER0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3FA6NER0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3FA6NER0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3FA6NER0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3FA6NER0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.05■■□□□ 1.12
TBC1D3FA6NER0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.05■■□□□ 1.12
TBC1D3FA6NER0 AC105233.4-201ENST00000642045 216 ntBASIC22.05■■□□□ 1.12
TBC1D3FA6NER0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3FA6NER0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3FA6NER0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3FA6NER0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3FA6NER0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3FA6NER0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3FA6NER0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
TBC1D3FA6NER0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TBC1D3FA6NER0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TBC1D3FA6NER0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
TBC1D3FA6NER0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
TBC1D3FA6NER0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms