Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TBC1D3EA0A087X179 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.12■■□□□ 1.13
TBC1D3EA0A087X179 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TBC1D3EA0A087X179 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.12■■□□□ 1.13
TBC1D3EA0A087X179 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TBC1D3EA0A087X179 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TBC1D3EA0A087X179 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.12■■□□□ 1.13
TBC1D3EA0A087X179 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TBC1D3EA0A087X179 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TBC1D3EA0A087X179 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.11■■□□□ 1.13
TBC1D3EA0A087X179 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D3EA0A087X179 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
TBC1D3EA0A087X179 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D3EA0A087X179 AC027612.3-201ENST00000413684 1047 ntBASIC22.11■■□□□ 1.13
TBC1D3EA0A087X179 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.11■■□□□ 1.13
TBC1D3EA0A087X179 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D3EA0A087X179 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D3EA0A087X179 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D3EA0A087X179 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D3EA0A087X179 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D3EA0A087X179 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D3EA0A087X179 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
TBC1D3EA0A087X179 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D3EA0A087X179 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D3EA0A087X179 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.1■■□□□ 1.13
TBC1D3EA0A087X179 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D3EA0A087X179 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.1■■□□□ 1.13
TBC1D3EA0A087X179 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.1■■□□□ 1.13
TBC1D3EA0A087X179 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D3EA0A087X179 AL353803.4-201ENST00000565882 1934 ntBASIC22.1■■□□□ 1.13
TBC1D3EA0A087X179 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 AL031602.1-201ENST00000633169 911 ntBASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 AC004687.1-201ENST00000579003 1625 ntBASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3EA0A087X179 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.08■■□□□ 1.13
TBC1D3EA0A087X179 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TBC1D3EA0A087X179 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TBC1D3EA0A087X179 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TBC1D3EA0A087X179 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
TBC1D3EA0A087X179 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
TBC1D3EA0A087X179 AC123595.1-201ENST00000440769 1046 ntBASIC22.08■■□□□ 1.13
TBC1D3EA0A087X179 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TBC1D3EA0A087X179 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.08■■□□□ 1.13
TBC1D3EA0A087X179 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.08■■□□□ 1.13
TBC1D3EA0A087X179 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
TBC1D3EA0A087X179 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3EA0A087X179 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3EA0A087X179 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
TBC1D3EA0A087X179 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
TBC1D3EA0A087X179 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.07■■□□□ 1.12
TBC1D3EA0A087X179 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3EA0A087X179 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3EA0A087X179 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.07■■□□□ 1.12
TBC1D3EA0A087X179 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3EA0A087X179 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3EA0A087X179 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3EA0A087X179 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.06■■□□□ 1.12
TBC1D3EA0A087X179 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.06■■□□□ 1.12
TBC1D3EA0A087X179 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3EA0A087X179 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3EA0A087X179 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3EA0A087X179 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.06■■□□□ 1.12
TBC1D3EA0A087X179 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
TBC1D3EA0A087X179 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
TBC1D3EA0A087X179 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3EA0A087X179 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.05■■□□□ 1.12
TBC1D3EA0A087X179 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3EA0A087X179 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3EA0A087X179 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3EA0A087X179 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3EA0A087X179 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.05■■□□□ 1.12
TBC1D3EA0A087X179 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.05■■□□□ 1.12
TBC1D3EA0A087X179 AC105233.4-201ENST00000642045 216 ntBASIC22.05■■□□□ 1.12
TBC1D3EA0A087X179 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3EA0A087X179 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3EA0A087X179 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3EA0A087X179 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3EA0A087X179 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3EA0A087X179 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
TBC1D3EA0A087X179 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TBC1D3EA0A087X179 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TBC1D3EA0A087X179 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
TBC1D3EA0A087X179 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
TBC1D3EA0A087X179 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.04■■□□□ 1.12
TBC1D3EA0A087X179 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms