Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SNX30Q5VWJ9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.38■■□□□ 1.33
SNX30Q5VWJ9 AC027682.1-201ENST00000562846 899 ntBASIC23.38■■□□□ 1.33
SNX30Q5VWJ9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SNX30Q5VWJ9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SNX30Q5VWJ9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SNX30Q5VWJ9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
SNX30Q5VWJ9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SNX30Q5VWJ9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.37■■□□□ 1.33
SNX30Q5VWJ9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.37■■□□□ 1.33
SNX30Q5VWJ9 BX842568.3-201ENST00000418104 571 ntBASIC23.37■■□□□ 1.33
SNX30Q5VWJ9 ZNRF2P3-201ENST00000424200 374 ntBASIC23.37■■□□□ 1.33
SNX30Q5VWJ9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SNX30Q5VWJ9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SNX30Q5VWJ9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SNX30Q5VWJ9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
SNX30Q5VWJ9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SNX30Q5VWJ9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SNX30Q5VWJ9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SNX30Q5VWJ9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SNX30Q5VWJ9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SNX30Q5VWJ9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
SNX30Q5VWJ9 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.36■■□□□ 1.33
SNX30Q5VWJ9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SNX30Q5VWJ9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.36■■□□□ 1.33
SNX30Q5VWJ9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
SNX30Q5VWJ9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.36■■□□□ 1.33
SNX30Q5VWJ9 LINC01529-204ENST00000636474 1715 ntBASIC23.36■■□□□ 1.33
SNX30Q5VWJ9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SNX30Q5VWJ9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SNX30Q5VWJ9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SNX30Q5VWJ9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SNX30Q5VWJ9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.35■■□□□ 1.33
SNX30Q5VWJ9 AC233992.3-201ENST00000607491 485 ntBASIC23.35■■□□□ 1.33
SNX30Q5VWJ9 CA15P2-201ENST00000611168 834 ntBASIC23.35■■□□□ 1.33
SNX30Q5VWJ9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SNX30Q5VWJ9 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SNX30Q5VWJ9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SNX30Q5VWJ9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SNX30Q5VWJ9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SNX30Q5VWJ9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.35■■□□□ 1.33
SNX30Q5VWJ9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SNX30Q5VWJ9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SNX30Q5VWJ9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SNX30Q5VWJ9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SNX30Q5VWJ9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SNX30Q5VWJ9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.34■■□□□ 1.33
SNX30Q5VWJ9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.34■■□□□ 1.33
SNX30Q5VWJ9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
SNX30Q5VWJ9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
SNX30Q5VWJ9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
SNX30Q5VWJ9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SNX30Q5VWJ9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SNX30Q5VWJ9 CLDN5-201ENST00000403084 2357 ntBASIC23.34■■□□□ 1.33
SNX30Q5VWJ9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNX30Q5VWJ9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNX30Q5VWJ9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNX30Q5VWJ9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNX30Q5VWJ9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNX30Q5VWJ9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNX30Q5VWJ9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNX30Q5VWJ9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.33■■□□□ 1.33
SNX30Q5VWJ9 MIR935-201ENST00000401179 91 ntBASIC23.33■■□□□ 1.33
SNX30Q5VWJ9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.33■■□□□ 1.33
SNX30Q5VWJ9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SNX30Q5VWJ9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SNX30Q5VWJ9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.33■■□□□ 1.32
SNX30Q5VWJ9 AC133637.1-201ENST00000624115 1537 ntBASIC23.33■■□□□ 1.32
SNX30Q5VWJ9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.32■■□□□ 1.32
SNX30Q5VWJ9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.32■■□□□ 1.32
SNX30Q5VWJ9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SNX30Q5VWJ9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SNX30Q5VWJ9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
SNX30Q5VWJ9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SNX30Q5VWJ9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.32■■□□□ 1.32
SNX30Q5VWJ9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.32■■□□□ 1.32
SNX30Q5VWJ9 AC008764.7-201ENST00000593779 1081 ntBASIC23.32■■□□□ 1.32
SNX30Q5VWJ9 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.32■■□□□ 1.32
SNX30Q5VWJ9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SNX30Q5VWJ9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SNX30Q5VWJ9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.32■■□□□ 1.32
SNX30Q5VWJ9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SNX30Q5VWJ9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SNX30Q5VWJ9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SNX30Q5VWJ9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SNX30Q5VWJ9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SNX30Q5VWJ9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.31■■□□□ 1.32
SNX30Q5VWJ9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SNX30Q5VWJ9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.31■■□□□ 1.32
SNX30Q5VWJ9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SNX30Q5VWJ9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.31■■□□□ 1.32
SNX30Q5VWJ9 AC099791.1-201ENST00000416440 715 ntBASIC23.31■■□□□ 1.32
SNX30Q5VWJ9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.31■■□□□ 1.32
SNX30Q5VWJ9 AC105265.2-201ENST00000467189 838 ntBASIC23.31■■□□□ 1.32
SNX30Q5VWJ9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SNX30Q5VWJ9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
SNX30Q5VWJ9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SNX30Q5VWJ9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.31■■□□□ 1.32
SNX30Q5VWJ9 ABCB10P4-201ENST00000566803 2184 ntBASIC23.31■■□□□ 1.32
SNX30Q5VWJ9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms