Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 PPP1R14BP2-201ENST00000426284 444 ntBASIC12.48□□□□□ -0.41
UBR4Q5T4S7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
UBR4Q5T4S7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 AC083880.1-201ENST00000608266 535 ntBASIC12.47□□□□□ -0.41
UBR4Q5T4S7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 PRKY-204ENST00000533551 1019 ntBASIC12.47□□□□□ -0.41
UBR4Q5T4S7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBR4Q5T4S7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
UBR4Q5T4S7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBR4Q5T4S7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
UBR4Q5T4S7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
UBR4Q5T4S7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.46□□□□□ -0.41
UBR4Q5T4S7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC12.46□□□□□ -0.41
UBR4Q5T4S7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBR4Q5T4S7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC12.46□□□□□ -0.41
UBR4Q5T4S7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.46□□□□□ -0.41
UBR4Q5T4S7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBR4Q5T4S7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC12.46□□□□□ -0.41
UBR4Q5T4S7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBR4Q5T4S7 AC007322.1-201ENST00000426983 750 ntBASIC12.46□□□□□ -0.41
UBR4Q5T4S7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBR4Q5T4S7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBR4Q5T4S7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
UBR4Q5T4S7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
UBR4Q5T4S7 UBE2SP1-201ENST00000450587 669 ntBASIC12.46□□□□□ -0.42
UBR4Q5T4S7 DUX4L4-201ENST00000566884 1269 ntBASIC12.46□□□□□ -0.42
UBR4Q5T4S7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.46□□□□□ -0.42
UBR4Q5T4S7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC12.46□□□□□ -0.42
UBR4Q5T4S7 TMPOP1-202ENST00000424642 1267 ntBASIC12.45□□□□□ -0.42
UBR4Q5T4S7 CNN2P6-201ENST00000439038 900 ntBASIC12.45□□□□□ -0.42
UBR4Q5T4S7 AC097493.4-201ENST00000641197 219 ntBASIC12.45□□□□□ -0.42
UBR4Q5T4S7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC12.45□□□□□ -0.42
UBR4Q5T4S7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UBR4Q5T4S7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC12.45□□□□□ -0.42
UBR4Q5T4S7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC12.45□□□□□ -0.42
UBR4Q5T4S7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.45□□□□□ -0.42
UBR4Q5T4S7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC12.45□□□□□ -0.42
UBR4Q5T4S7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBR4Q5T4S7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC12.45□□□□□ -0.42
UBR4Q5T4S7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBR4Q5T4S7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBR4Q5T4S7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 UBE2DNL-204ENST00000602536 740 ntBASIC12.44□□□□□ -0.42
UBR4Q5T4S7 AC105233.4-201ENST00000642045 216 ntBASIC12.44□□□□□ -0.42
UBR4Q5T4S7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UBR4Q5T4S7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC12.43□□□□□ -0.42
UBR4Q5T4S7 KRT126P-201ENST00000549467 1181 ntBASIC12.43□□□□□ -0.42
UBR4Q5T4S7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.43□□□□□ -0.42
UBR4Q5T4S7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBR4Q5T4S7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBR4Q5T4S7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC12.43□□□□□ -0.42
UBR4Q5T4S7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBR4Q5T4S7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBR4Q5T4S7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC12.43□□□□□ -0.42
UBR4Q5T4S7 AC133561.5-201ENST00000635547 218 ntBASIC12.43□□□□□ -0.42
UBR4Q5T4S7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
UBR4Q5T4S7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC12.43□□□□□ -0.42
UBR4Q5T4S7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBR4Q5T4S7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBR4Q5T4S7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBR4Q5T4S7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms