RNA–Protein interactions for RNA: ENST00000615575.4

FAM228B-210, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 1,357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-210ENST00000615575 NISCHQ9Y2I1 1504 aa46.32■■■■■ 5.01
FAM228B-210ENST00000615575 ABCC9O60706 1549 aa42.5■■■■■ 4.39
FAM228B-210ENST00000615575 CCDC180Q9P1Z9 1646 aa41.83■■■■■ 4.29
FAM228B-210ENST00000615575 DNAJC5BQ9UF47 199 aa40.38■■■■■ 4.06
FAM228B-210ENST00000615575 RB1CC1Q8TDY2 1594 aa40.1■■■■■ 4.01
FAM228B-210ENST00000615575 NACADO15069 1562 aa39.64■■■■□ 3.94
FAM228B-210ENST00000615575 PABPN1Q86U42 306 aaKnown RBP eCLIP39.44■■■■□ 3.9
FAM228B-210ENST00000615575 UNC13AQ9UPW8 1703 aa39.32■■■■□ 3.89
FAM228B-210ENST00000615575 DCAF8L2P0C7V8 631 aa39.32■■■■□ 3.88
FAM228B-210ENST00000615575 BICRAQ9NZM4 1560 aa39.05■■■■□ 3.84
FAM228B-210ENST00000615575 MYO15BQ96JP2 1530 aa38.84■■■■□ 3.81
FAM228B-210ENST00000615575 CC2D2AQ9P2K1 1620 aa38.35■■■■□ 3.73
FAM228B-210ENST00000615575 SHROOM4Q9ULL8 1493 aa38.31■■■■□ 3.72
FAM228B-210ENST00000615575 ZCCHC6Q5VYS8 1495 aaKnown RBP38.3■■■■□ 3.72
FAM228B-210ENST00000615575 CECR2Q9BXF3 1484 aa38.3■■■■□ 3.72
FAM228B-210ENST00000615575 SCRIBQ14160 1630 aa38.18■■■■□ 3.7
FAM228B-210ENST00000615575 DCAF1Q9Y4B6 1507 aa38.16■■■■□ 3.7
FAM228B-210ENST00000615575 EIF4G1Q04637 1599 aaKnown RBP38.1■■■■□ 3.69
FAM228B-210ENST00000615575 DNAJC5Q9H3Z4 198 aa37.42■■■■□ 3.58
FAM228B-210ENST00000615575 CUX2O14529 1486 aa36.78■■■■□ 3.48
FAM228B-210ENST00000615575 ERCC6Q03468 1493 aa36.68■■■■□ 3.46
FAM228B-210ENST00000615575 NCAPD3P42695 1498 aa36.6■■■■□ 3.45
FAM228B-210ENST00000615575 ATAD2BQ9ULI0 1458 aa36.46■■■■□ 3.43
FAM228B-210ENST00000615575 NESP48681 1621 aa36.37■■■■□ 3.41
FAM228B-210ENST00000615575 HMGXB3Q12766 1538 aa36.32■■■■□ 3.4
FAM228B-210ENST00000615575 SMARCA4P51532 1647 aa36.31■■■■□ 3.4
FAM228B-210ENST00000615575 SMARCA2P51531 1590 aa36.29■■■■□ 3.4
FAM228B-210ENST00000615575 THOC2Q8NI27 1593 aaKnown RBP36.12■■■■□ 3.37
FAM228B-210ENST00000615575 BAZ1BQ9UIG0 1483 aaKnown RBP36.08■■■■□ 3.37
FAM228B-210ENST00000615575 BAZ1AQ9NRL2 1556 aaPredicted RBP35.98■■■■□ 3.35
FAM228B-210ENST00000615575 PEG3Q9GZU2 1588 aa35.9■■■■□ 3.34
FAM228B-210ENST00000615575 LAMC3Q9Y6N6 1575 aa35.9■■■■□ 3.34
FAM228B-210ENST00000615575 KIF21AQ7Z4S6 1674 aa35.88■■■■□ 3.34
FAM228B-210ENST00000615575 MROH2BQ7Z745 1585 aa35.75■■■■□ 3.31
FAM228B-210ENST00000615575 PDS5BQ9NTI5 1447 aa35.66■■■■□ 3.3
FAM228B-210ENST00000615575 TRIM41Q8WV44 630 aa35.62■■■■□ 3.29
FAM228B-210ENST00000615575 MRC2Q9UBG0 1479 aa35.48■■■■□ 3.27
FAM228B-210ENST00000615575 CADPSQ9ULU8 1353 aa35.46■■■■□ 3.27
FAM228B-210ENST00000615575 WDR62O43379 1518 aa35.43■■■■□ 3.26
FAM228B-210ENST00000615575 WIZO95785 1651 aa35.31■■■■□ 3.24
FAM228B-210ENST00000615575 CEP164Q9UPV0 1460 aa35.21■■■■□ 3.23
FAM228B-210ENST00000615575 FANCD2Q9BXW9 1451 aa35.12■■■■□ 3.21
FAM228B-210ENST00000615575 CFTRP13569 1480 aa34.96■■■■□ 3.19
FAM228B-210ENST00000615575 OSCARQ8IYS5 282 aa34.92■■■■□ 3.18
FAM228B-210ENST00000615575 URB2Q14146 1524 aaKnown RBP34.92■■■■□ 3.18
FAM228B-210ENST00000615575 TOP2AP11388 1531 aaKnown RBP34.77■■■■□ 3.16
FAM228B-210ENST00000615575 RSF1Q96T23 1441 aaPredicted RBP34.73■■■■□ 3.15
FAM228B-210ENST00000615575 RIMBP3CA6NJZ7 1639 aa34.71■■■■□ 3.15
FAM228B-210ENST00000615575 RIMBP3BA6NNM3 1639 aa34.71■■■■□ 3.15
FAM228B-210ENST00000615575 RIMBP3Q9UFD9 1639 aa34.71■■■■□ 3.15
FAM228B-210ENST00000615575 PRDM2Q13029 1718 aa34.63■■■■□ 3.13
FAM228B-210ENST00000615575 ZNF608Q9ULD9 1512 aaPredicted RBP34.6■■■■□ 3.13
FAM228B-210ENST00000615575 ARHGEF11O15085 1522 aa34.52■■■■□ 3.12
FAM228B-210ENST00000615575 IFT140Q96RY7 1462 aa34.49■■■■□ 3.11
FAM228B-210ENST00000615575 TOPBP1Q92547 1522 aa34.41■■■■□ 3.1
FAM228B-210ENST00000615575 EIF4G3O43432 1585 aaKnown RBP34.39■■■■□ 3.1
FAM228B-210ENST00000615575 CCDC88BA6NC98 1476 aa34.36■■■■□ 3.09
FAM228B-210ENST00000615575 CHD1O14646 1710 aa34.26■■■■□ 3.08
FAM228B-210ENST00000615575 CYB5RLQ6IPT4 315 aa34.22■■■■□ 3.07
FAM228B-210ENST00000615575 DNMBPQ6XZF7 1577 aa34.21■■■■□ 3.07
FAM228B-210ENST00000615575 ARAP1Q96P48 1450 aa34.17■■■■□ 3.06
FAM228B-210ENST00000615575 TARBP1Q13395 1621 aaKnown RBP34.17■■■■□ 3.06
FAM228B-210ENST00000615575 AQRO60306 1485 aaKnown RBP eCLIP34.16■■■■□ 3.06
FAM228B-210ENST00000615575 ABCC8Q09428 1581 aa34.15■■■■□ 3.06
FAM228B-210ENST00000615575 TRHP20396 242 aaPredicted RBP34.03■■■■□ 3.04
FAM228B-210ENST00000615575 POLA1P09884 1462 aaPredicted RBP34.02■■■■□ 3.04
FAM228B-210ENST00000615575 FBLN2P98095 1184 aa34.01■■■■□ 3.04
FAM228B-210ENST00000615575 RAD54L2Q9Y4B4 1467 aa33.93■■■■□ 3.02
FAM228B-210ENST00000615575 TDRD9Q8NDG6 1382 aaKnown RBP33.85■■■■□ 3.01
FAM228B-210ENST00000615575 SNAPC4Q5SXM2 1469 aa33.83■■■■□ 3.01
FAM228B-210ENST00000615575 CLASP1Q7Z460 1538 aa33.82■■■■□ 3
FAM228B-210ENST00000615575 SOGA1O94964 1423 aa33.78■■■■□ 3
FAM228B-210ENST00000615575 FGD5Q6ZNL6 1462 aa33.73■■■□□ 2.99
FAM228B-210ENST00000615575 SYNJ1O43426 1573 aa33.68■■■□□ 2.98
FAM228B-210ENST00000615575 WDR97A6NE52 1622 aa33.67■■■□□ 2.98
FAM228B-210ENST00000615575 CUX1P39880 1505 aa33.63■■■□□ 2.97
FAM228B-210ENST00000615575 MAGI1Q96QZ7 1491 aaPredicted RBP33.62■■■□□ 2.97
FAM228B-210ENST00000615575 CHMP7Q8WUX9 453 aaPredicted RBP33.6■■■□□ 2.97
FAM228B-210ENST00000615575 GRIN2BQ13224 1484 aa33.58■■■□□ 2.97
FAM228B-210ENST00000615575 SYNJ2O15056 1496 aa33.54■■■□□ 2.96
FAM228B-210ENST00000615575 PBRM1Q86U86 1689 aa33.51■■■□□ 2.95
FAM228B-210ENST00000615575 GAPVD1Q14C86 1478 aa33.45■■■□□ 2.95
FAM228B-210ENST00000615575 AEBP2Q6ZN18 517 aaPredicted RBP33.45■■■□□ 2.94
FAM228B-210ENST00000615575 ABCA5Q8WWZ7 1642 aa33.34■■■□□ 2.93
FAM228B-210ENST00000615575 ERCC6L2Q5T890 1561 aa33.31■■■□□ 2.92
FAM228B-210ENST00000615575 ABCA10Q8WWZ4 1543 aa33.26■■■□□ 2.91
FAM228B-210ENST00000615575 GRIN2AQ12879 1464 aa33.18■■■□□ 2.9
FAM228B-210ENST00000615575 ADAMTS12P58397 1594 aa33.15■■■□□ 2.9
FAM228B-210ENST00000615575 CEP170Q5SW79 1584 aa33.15■■■□□ 2.9
FAM228B-210ENST00000615575 NUP160Q12769 1436 aa33.08■■■□□ 2.89
FAM228B-210ENST00000615575 SHROOM2Q13796 1616 aa33.04■■■□□ 2.88
FAM228B-210ENST00000615575 KIF13AQ9H1H9 1805 aa32.97■■■□□ 2.87
FAM228B-210ENST00000615575 WRNQ14191 1432 aaPredicted RBP eCLIP32.96■■■□□ 2.87
FAM228B-210ENST00000615575 FHAD1B1AJZ9 1412 aa32.91■■■□□ 2.86
FAM228B-210ENST00000615575 BIVM-ERCC5R4GMW8 1640 aa32.9■■■□□ 2.86
FAM228B-210ENST00000615575 TOP2BQ02880 1626 aa32.87■■■□□ 2.85
FAM228B-210ENST00000615575 ERICH3Q5RHP9 1530 aa32.82■■■□□ 2.84
FAM228B-210ENST00000615575 PRG4Q92954 1404 aaPredicted RBP32.81■■■□□ 2.84
FAM228B-210ENST00000615575 SUPT5HO00267 1087 aaKnown RBP32.73■■■□□ 2.83
FAM228B-210ENST00000615575 RUSC2Q8N2Y8 1516 aa32.7■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms