Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNAP47Q5SQN1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.53■■□□□ 1.04
SNAP47Q5SQN1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNAP47Q5SQN1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.52■■□□□ 1.04
SNAP47Q5SQN1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNAP47Q5SQN1 SLC47A1P1-202ENST00000449666 945 ntBASIC21.52■■□□□ 1.04
SNAP47Q5SQN1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.52■■□□□ 1.04
SNAP47Q5SQN1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.52■■□□□ 1.04
SNAP47Q5SQN1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SNAP47Q5SQN1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNAP47Q5SQN1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.52■■□□□ 1.04
SNAP47Q5SQN1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNAP47Q5SQN1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SNAP47Q5SQN1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SNAP47Q5SQN1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.51■■□□□ 1.03
SNAP47Q5SQN1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SNAP47Q5SQN1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNAP47Q5SQN1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNAP47Q5SQN1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNAP47Q5SQN1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNAP47Q5SQN1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNAP47Q5SQN1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.51■■□□□ 1.03
SNAP47Q5SQN1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SNAP47Q5SQN1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.51■■□□□ 1.03
SNAP47Q5SQN1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNAP47Q5SQN1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.51■■□□□ 1.03
SNAP47Q5SQN1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNAP47Q5SQN1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SNAP47Q5SQN1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNAP47Q5SQN1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.51■■□□□ 1.03
SNAP47Q5SQN1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNAP47Q5SQN1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SNAP47Q5SQN1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNAP47Q5SQN1 AC133637.1-201ENST00000624115 1537 ntBASIC21.5■■□□□ 1.03
SNAP47Q5SQN1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.5■■□□□ 1.03
SNAP47Q5SQN1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNAP47Q5SQN1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNAP47Q5SQN1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNAP47Q5SQN1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNAP47Q5SQN1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SNAP47Q5SQN1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SNAP47Q5SQN1 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.5■■□□□ 1.03
SNAP47Q5SQN1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNAP47Q5SQN1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SNAP47Q5SQN1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNAP47Q5SQN1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNAP47Q5SQN1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SNAP47Q5SQN1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNAP47Q5SQN1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SNAP47Q5SQN1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNAP47Q5SQN1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNAP47Q5SQN1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNAP47Q5SQN1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.49■■□□□ 1.03
SNAP47Q5SQN1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNAP47Q5SQN1 TSPY26P-201ENST00000476365 1326 ntBASIC21.49■■□□□ 1.03
SNAP47Q5SQN1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNAP47Q5SQN1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.48■■□□□ 1.03
SNAP47Q5SQN1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SNAP47Q5SQN1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.48■■□□□ 1.03
SNAP47Q5SQN1 AC087623.3-201ENST00000607047 1098 ntBASIC21.48■■□□□ 1.03
SNAP47Q5SQN1 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.48■■□□□ 1.03
SNAP47Q5SQN1 CLDN5-201ENST00000403084 2357 ntBASIC21.48■■□□□ 1.03
SNAP47Q5SQN1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNAP47Q5SQN1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNAP47Q5SQN1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SNAP47Q5SQN1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SNAP47Q5SQN1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNAP47Q5SQN1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNAP47Q5SQN1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SNAP47Q5SQN1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNAP47Q5SQN1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.47■■□□□ 1.03
SNAP47Q5SQN1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.47■■□□□ 1.03
SNAP47Q5SQN1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.47■■□□□ 1.03
SNAP47Q5SQN1 MIR6821-201ENST00000617625 74 ntBASIC21.47■■□□□ 1.03
SNAP47Q5SQN1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNAP47Q5SQN1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SNAP47Q5SQN1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 AC097381.1-201ENST00000429019 1296 ntBASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNAP47Q5SQN1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SNAP47Q5SQN1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.45■■□□□ 1.02
SNAP47Q5SQN1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SNAP47Q5SQN1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNAP47Q5SQN1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms