Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 PKD1P6-201ENST00000343738 4769 ntBASIC19.54■□□□□ 0.72
CCR9P51686 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.54■□□□□ 0.72
CCR9P51686 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCR9P51686 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.54■□□□□ 0.72
CCR9P51686 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CCR9P51686 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCR9P51686 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCR9P51686 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCR9P51686 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.54■□□□□ 0.72
CCR9P51686 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCR9P51686 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.53■□□□□ 0.72
CCR9P51686 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCR9P51686 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.53■□□□□ 0.72
CCR9P51686 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCR9P51686 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.53■□□□□ 0.72
CCR9P51686 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCR9P51686 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCR9P51686 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.52■□□□□ 0.72
CCR9P51686 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCR9P51686 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CCR9P51686 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCR9P51686 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.52■□□□□ 0.72
CCR9P51686 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCR9P51686 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCR9P51686 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.52■□□□□ 0.72
CCR9P51686 PVT1_1.1-201ENST00000615125 194 ntBASIC19.52■□□□□ 0.72
CCR9P51686 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCR9P51686 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCR9P51686 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCR9P51686 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCR9P51686 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCR9P51686 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.52■□□□□ 0.71
CCR9P51686 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CCR9P51686 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCR9P51686 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCR9P51686 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.51■□□□□ 0.71
CCR9P51686 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCR9P51686 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.51■□□□□ 0.71
CCR9P51686 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCR9P51686 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCR9P51686 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CCR9P51686 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.51■□□□□ 0.71
CCR9P51686 ATP5G2P3-201ENST00000429083 425 ntBASIC19.51■□□□□ 0.71
CCR9P51686 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCR9P51686 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.51■□□□□ 0.71
CCR9P51686 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CCR9P51686 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCR9P51686 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCR9P51686 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCR9P51686 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.5■□□□□ 0.71
CCR9P51686 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCR9P51686 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCR9P51686 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.5■□□□□ 0.71
CCR9P51686 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.5■□□□□ 0.71
CCR9P51686 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.5■□□□□ 0.71
CCR9P51686 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.5■□□□□ 0.71
CCR9P51686 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.5■□□□□ 0.71
CCR9P51686 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCR9P51686 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.5■□□□□ 0.71
CCR9P51686 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCR9P51686 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCR9P51686 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCR9P51686 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCR9P51686 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCR9P51686 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.49■□□□□ 0.71
CCR9P51686 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCR9P51686 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCR9P51686 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCR9P51686 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCR9P51686 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCR9P51686 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.49■□□□□ 0.71
CCR9P51686 AC004987.1-201ENST00000428627 508 ntBASIC19.49■□□□□ 0.71
CCR9P51686 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCR9P51686 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCR9P51686 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCR9P51686 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.49■□□□□ 0.71
CCR9P51686 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CCR9P51686 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.49■□□□□ 0.71
CCR9P51686 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.48■□□□□ 0.71
CCR9P51686 AC144652.1-201ENST00000609974 1624 ntBASIC19.48■□□□□ 0.71
CCR9P51686 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCR9P51686 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.48■□□□□ 0.71
CCR9P51686 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.48■□□□□ 0.71
CCR9P51686 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCR9P51686 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCR9P51686 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.48■□□□□ 0.71
CCR9P51686 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCR9P51686 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCR9P51686 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CCR9P51686 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCR9P51686 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.47■□□□□ 0.71
CCR9P51686 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.47■□□□□ 0.71
CCR9P51686 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.47■□□□□ 0.71
CCR9P51686 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCR9P51686 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCR9P51686 AC092053.2-201ENST00000640557 1818 ntBASIC19.46■□□□□ 0.71
CCR9P51686 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.46■□□□□ 0.71
CCR9P51686 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCR9P51686 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.46■□□□□ 0.71
CCR9P51686 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms