Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 SPC24YMR117C 642 nt5.6□□□□□ -1.51
SSM4P40318 MTC4YBR255W 2085 nt5.6□□□□□ -1.51
SSM4P40318 OMS1YDR316W 1416 nt5.6□□□□□ -1.51
SSM4P40318 YCR085WYCR085W 354 nt5.59□□□□□ -1.51
SSM4P40318 URA3YEL021W 804 nt5.59□□□□□ -1.51
SSM4P40318 YGL088WYGL088W 366 nt5.59□□□□□ -1.51
SSM4P40318 YBL036CYBL036C 774 nt5.59□□□□□ -1.51
SSM4P40318 PWR1PWR1 941 nt5.59□□□□□ -1.51
SSM4P40318 ABF1YKL112W 2196 nt5.59□□□□□ -1.51
SSM4P40318 PMC1YGL006W 3522 nt5.59□□□□□ -1.51
SSM4P40318 VPS73YGL104C 1461 nt5.59□□□□□ -1.51
SSM4P40318 TRS120YDR407C 3870 nt5.59□□□□□ -1.52
SSM4P40318 PFK1YGR240C 2964 nt5.58□□□□□ -1.52
SSM4P40318 ACE2YLR131C 2313 nt5.58□□□□□ -1.52
SSM4P40318 TRM8YDL201W 861 nt5.58□□□□□ -1.52
SSM4P40318 YDR445CYDR445C 408 nt5.58□□□□□ -1.52
SSM4P40318 IFM1YOL023W 2031 nt5.58□□□□□ -1.52
SSM4P40318 VBA2YBR293W 1425 nt5.58□□□□□ -1.52
SSM4P40318 YBR225WYBR225W 2703 nt5.58□□□□□ -1.52
SSM4P40318 SSU1YPL092W 1377 nt5.58□□□□□ -1.52
SSM4P40318 FLC3YGL139W 2409 nt5.58□□□□□ -1.52
SSM4P40318 CPR1YDR155C 489 nt5.57□□□□□ -1.52
SSM4P40318 MSW1YDR268W 1140 nt5.57□□□□□ -1.52
SSM4P40318 ISA1YLL027W 753 nt5.57□□□□□ -1.52
SSM4P40318 PEX12YMR026C 1200 nt5.57□□□□□ -1.52
SSM4P40318 snR34snR34 203 nt5.57□□□□□ -1.52
SSM4P40318 SNT1YCR033W 3681 nt5.57□□□□□ -1.52
SSM4P40318 CWC2YDL209C 1020 nt5.56□□□□□ -1.52
SSM4P40318 MOB2YFL034C-B 864 nt5.56□□□□□ -1.52
SSM4P40318 YJR096WYJR096W 849 nt5.56□□□□□ -1.52
SSM4P40318 RMI1YPL024W 726 nt5.56□□□□□ -1.52
SSM4P40318 SSL1YLR005W 1386 nt5.56□□□□□ -1.52
SSM4P40318 YDR271CYDR271C 372 nt5.55□□□□□ -1.52
SSM4P40318 PHM8YER037W 966 nt5.55□□□□□ -1.52
SSM4P40318 YKE4YIL023C 1041 nt5.55□□□□□ -1.52
SSM4P40318 YKL162C-AYKL162C-A 153 nt5.55□□□□□ -1.52
SSM4P40318 ENV9YOR246C 993 nt5.55□□□□□ -1.52
SSM4P40318 HRK1YOR267C 2280 nt5.54□□□□□ -1.52
SSM4P40318 LUC7YDL087C 786 nt5.54□□□□□ -1.52
SSM4P40318 GLE2YER107C 1098 nt5.54□□□□□ -1.52
SSM4P40318 PRM9YAR031W 897 nt5.54□□□□□ -1.52
SSM4P40318 NRM1YNR009W 750 nt5.54□□□□□ -1.52
SSM4P40318 SUM1YDR310C 3189 nt5.54□□□□□ -1.52
SSM4P40318 TIP20YGL145W 2106 nt5.54□□□□□ -1.52
SSM4P40318 VHC1YBR235W 3363 nt5.54□□□□□ -1.52
SSM4P40318 SLA1YBL007C 3735 nt5.53□□□□□ -1.52
SSM4P40318 DPH1YIL103W 1278 nt5.53□□□□□ -1.52
SSM4P40318 MSA2YKR077W 1092 nt5.53□□□□□ -1.52
SSM4P40318 YBL059WYBL059W 582 nt5.53□□□□□ -1.52
SSM4P40318 NRK1YNL129W 723 nt5.53□□□□□ -1.52
SSM4P40318 AIP1YMR092C 1848 nt5.53□□□□□ -1.52
SSM4P40318 PCL8YPL219W 1479 nt5.53□□□□□ -1.52
SSM4P40318 YDR230WYDR230W 348 nt5.52□□□□□ -1.53
SSM4P40318 RPL34AYER056C-A 366 nt5.52□□□□□ -1.53
SSM4P40318 RHO3YIL118W 696 nt5.52□□□□□ -1.53
SSM4P40318 KTR2YKR061W 1278 nt5.52□□□□□ -1.53
SSM4P40318 RSF1YMR030W 1131 nt5.52□□□□□ -1.53
SSM4P40318 PDR16YNL231C 1056 nt5.52□□□□□ -1.53
SSM4P40318 DEG1YFL001W 1329 nt5.52□□□□□ -1.53
SSM4P40318 MED2YDL005C 1296 nt5.51□□□□□ -1.53
SSM4P40318 MCM1YMR043W 861 nt5.51□□□□□ -1.53
SSM4P40318 SNO1YMR095C 675 nt5.51□□□□□ -1.53
SSM4P40318 GPI12YMR281W 915 nt5.51□□□□□ -1.53
SSM4P40318 UBC1YDR177W 648 nt5.5□□□□□ -1.53
SSM4P40318 EDC1YGL222C 528 nt5.5□□□□□ -1.53
SSM4P40318 ADD66YKL206C 804 nt5.5□□□□□ -1.53
SSM4P40318 RPS0BYLR048W 759 nt5.5□□□□□ -1.53
SSM4P40318 YMR114CYMR114C 1107 nt5.5□□□□□ -1.53
SSM4P40318 FES1YBR101C 873 nt5.5□□□□□ -1.53
SSM4P40318 YBR219CYBR219C 384 nt5.5□□□□□ -1.53
SSM4P40318 THI7YLR237W 1797 nt5.5□□□□□ -1.53
SSM4P40318 FAT1YBR041W 2010 nt5.5□□□□□ -1.53
SSM4P40318 YLR036CYLR036C 612 nt5.49□□□□□ -1.53
SSM4P40318 FSH3YOR280C 801 nt5.49□□□□□ -1.53
SSM4P40318 SMA1YPL027W 738 nt5.49□□□□□ -1.53
SSM4P40318 PAF1YBR279W 1338 nt5.49□□□□□ -1.53
SSM4P40318 MRPL7YDR237W 879 nt5.48□□□□□ -1.53
SSM4P40318 DSD1YGL196W 1287 nt5.48□□□□□ -1.53
SSM4P40318 YGR273CYGR273C 525 nt5.48□□□□□ -1.53
SSM4P40318 YIL086CYIL086C 309 nt5.48□□□□□ -1.53
SSM4P40318 SHE1YBL031W 1017 nt5.48□□□□□ -1.53
SSM4P40318 POP3YNL282W 588 nt5.48□□□□□ -1.53
SSM4P40318 CKS1YBR135W 453 nt5.48□□□□□ -1.53
SSM4P40318 IDS2YJL146W 1410 nt5.48□□□□□ -1.53
SSM4P40318 COP1YDL145C 3606 nt5.48□□□□□ -1.53
SSM4P40318 EKI1YDR147W 1605 nt5.48□□□□□ -1.53
SSM4P40318 RAD16YBR114W 2373 nt5.48□□□□□ -1.53
SSM4P40318 VBA1YMR088C 1689 nt5.48□□□□□ -1.53
SSM4P40318 GAL4YPL248C 2646 nt5.48□□□□□ -1.53
SSM4P40318 EXO70YJL085W 1872 nt5.48□□□□□ -1.53
SSM4P40318 OTU1YFL044C 906 nt5.48□□□□□ -1.53
SSM4P40318 TIM21YGR033C 720 nt5.48□□□□□ -1.53
SSM4P40318 RPS31YLR167W 459 nt5.48□□□□□ -1.53
SSM4P40318 COQ5YML110C 924 nt5.48□□□□□ -1.53
SSM4P40318 ASI2YNL159C 870 nt5.48□□□□□ -1.53
SSM4P40318 YHR177WYHR177W 1362 nt5.47□□□□□ -1.53
SSM4P40318 THI22YPR121W 1719 nt5.47□□□□□ -1.53
SSM4P40318 IMA1YGR287C 1770 nt5.47□□□□□ -1.53
SSM4P40318 IMP1YMR150C 573 nt5.47□□□□□ -1.53
SSM4P40318 ROT1YMR200W 771 nt5.47□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 25.1 ms