RNA–Protein interactions for RNA: YPL219W

PCL8, Transcript of Cyclin, yeastyeast

Gene PCL8, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCL8YPL219W MTC1P47018 478 aaKnown RBP13.64□□□□□ -0.23
PCL8YPL219W DRS1P32892 752 aaKnown RBP12.82□□□□□ -0.36
PCL8YPL219W FAP1P53971 965 aa12.34□□□□□ -0.43
PCL8YPL219W PRY3P47033 881 aa11.55□□□□□ -0.56
PCL8YPL219W PRI1P10363 409 aa11.47□□□□□ -0.57
PCL8YPL219W AAD16Q02895 342 aa11.43□□□□□ -0.58
PCL8YPL219W ISW2Q08773 1120 aa11.37□□□□□ -0.59
PCL8YPL219W DIP2Q12220 943 aaPredicted RBP11.22□□□□□ -0.61
PCL8YPL219W RPG1P38249 964 aaKnown RBP11.2□□□□□ -0.62
PCL8YPL219W TSR3Q12094 313 aaKnown RBP10.87□□□□□ -0.67
PCL8YPL219W RSE1Q04693 1361 aaKnown RBP10.84□□□□□ -0.67
PCL8YPL219W HAA1Q12753 694 aaKnown RBP10.82□□□□□ -0.68
PCL8YPL219W AVT3P36062 692 aa10.75□□□□□ -0.69
PCL8YPL219W YCK3P39962 524 aa10.74□□□□□ -0.69
PCL8YPL219W BFR2Q06631 534 aaKnown RBP10.68□□□□□ -0.7
PCL8YPL219W RPL17AP05740 184 aaKnown RBP10.49□□□□□ -0.73
PCL8YPL219W REB1P21538 810 aa10.49□□□□□ -0.73
PCL8YPL219W MRPL32P25348 183 aa10.49□□□□□ -0.73
PCL8YPL219W RPL17BP46990 184 aaKnown RBP10.49□□□□□ -0.73
PCL8YPL219W TFA1P36100 482 aa10.44□□□□□ -0.74
PCL8YPL219W YGL015CP33199 130 aa10.04□□□□□ -0.8
PCL8YPL219W SPT21P35209 758 aa9.96□□□□□ -0.82
PCL8YPL219W CDC27P38042 758 aa9.88□□□□□ -0.83
PCL8YPL219W YKR023WP36119 530 aaKnown RBP9.85□□□□□ -0.83
PCL8YPL219W HOP09932 586 aa9.7□□□□□ -0.86
PCL8YPL219W TFC8Q12308 588 aa9.67□□□□□ -0.86
PCL8YPL219W DCD1P06773 312 aa9.65□□□□□ -0.87
PCL8YPL219W RIM101P33400 625 aa9.65□□□□□ -0.87
PCL8YPL219W UBP10P53874 792 aaPredicted RBP9.64□□□□□ -0.87
PCL8YPL219W MAP2P38174 421 aaKnown RBP9.59□□□□□ -0.87
PCL8YPL219W RQC2Q12532 1038 aaKnown RBP9.45□□□□□ -0.9
PCL8YPL219W SCY1P53009 804 aa9.44□□□□□ -0.9
PCL8YPL219W BCH2P36122 765 aa9.36□□□□□ -0.91
PCL8YPL219W SLX5P32828 619 aaKnown RBP9.34□□□□□ -0.91
PCL8YPL219W TIF4632P39936 914 aaKnown RBP9.31□□□□□ -0.92
PCL8YPL219W OXP1P28273 1286 aa9.3□□□□□ -0.92
PCL8YPL219W YIL055CP40523 627 aaKnown RBP9.3□□□□□ -0.92
PCL8YPL219W PTP3P40048 928 aa9.27□□□□□ -0.93
PCL8YPL219W TGL3P40308 642 aa9.21□□□□□ -0.94
PCL8YPL219W EPS1P40557 701 aa9.15□□□□□ -0.95
PCL8YPL219W BUD31P25337 157 aaPredicted RBP9.13□□□□□ -0.95
PCL8YPL219W YAH1Q12184 172 aaKnown RBP9.13□□□□□ -0.95
PCL8YPL219W BDF1P35817 686 aa9.1□□□□□ -0.95
PCL8YPL219W RSM7P47150 247 aa9.09□□□□□ -0.95
PCL8YPL219W BBC1P47068 1157 aa9.06□□□□□ -0.96
PCL8YPL219W AI2P03876 854 aa9□□□□□ -0.97
PCL8YPL219W UBP9P39967 754 aa8.98□□□□□ -0.97
PCL8YPL219W TAF7Q05021 590 aa8.96□□□□□ -0.97
PCL8YPL219W YLR271WQ06152 274 aa8.9□□□□□ -0.98
PCL8YPL219W DMA1P38823 416 aa8.86□□□□□ -0.99
PCL8YPL219W SSP1P38871 571 aa8.85□□□□□ -0.99
PCL8YPL219W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
PCL8YPL219W YOR238WQ08634 303 aa8.83□□□□□ -1
PCL8YPL219W MST1P07236 462 aa8.77□□□□□ -1
PCL8YPL219W NSR1P27476 414 aaKnown RBP RIP-Chip data8.77□□□□□ -1not detected
PCL8YPL219W YAP5P40574 245 aa8.77□□□□□ -1
PCL8YPL219W SIS1P25294 352 aaKnown RBP8.77□□□□□ -1.01
PCL8YPL219W PSD2P53037 1138 aaKnown RBP8.76□□□□□ -1.01
PCL8YPL219W MRM1P25270 412 aa8.7□□□□□ -1.02
PCL8YPL219W YBL029C-AQ3E756 94 aa8.68□□□□□ -1.02
PCL8YPL219W MGA2P40578 1113 aa8.64□□□□□ -1.03
PCL8YPL219W GTT3P39996 337 aa8.63□□□□□ -1.03
PCL8YPL219W CST9Q06032 482 aa8.6□□□□□ -1.03
PCL8YPL219W WSC3Q12215 556 aa8.59□□□□□ -1.03
PCL8YPL219W VNX1P42839 908 aa8.58□□□□□ -1.04
PCL8YPL219W PIB1Q06651 286 aa8.57□□□□□ -1.04
PCL8YPL219W SPP1Q03012 353 aa8.55□□□□□ -1.04
PCL8YPL219W RTG3P38165 486 aa8.53□□□□□ -1.04
PCL8YPL219W YMR1P47147 688 aaKnown RBP RIP-Chip data8.48□□□□□ -1.05not detected
PCL8YPL219W TIF11P38912 153 aaKnown RBP8.45□□□□□ -1.06
PCL8YPL219W DBP1P24784 617 aaKnown RBP8.45□□□□□ -1.06
PCL8YPL219W VPS29P38759 282 aa8.45□□□□□ -1.06
PCL8YPL219W YFR006WP43590 535 aa8.41□□□□□ -1.06
PCL8YPL219W RCR1P38212 213 aa8.38□□□□□ -1.07
PCL8YPL219W ULI1P43604 169 aa8.38□□□□□ -1.07
PCL8YPL219W STS1P38637 319 aa8.36□□□□□ -1.07
PCL8YPL219W MSB4Q12317 492 aa8.36□□□□□ -1.07
PCL8YPL219W LEO1P38439 464 aa8.35□□□□□ -1.07
PCL8YPL219W EAP1P36041 632 aaKnown RBP8.34□□□□□ -1.07
PCL8YPL219W SET4P42948 560 aa8.33□□□□□ -1.08
PCL8YPL219W VMA1P17255 1071 aaKnown RBP8.32□□□□□ -1.08
PCL8YPL219W YOL036WQ08206 761 aa8.32□□□□□ -1.08
PCL8YPL219W LDB19Q12502 818 aa8.32□□□□□ -1.08
PCL8YPL219W YJL171CP46992 396 aa8.32□□□□□ -1.08
PCL8YPL219W IOC2Q12072 812 aa8.29□□□□□ -1.08
PCL8YPL219W FKH1P40466 484 aa8.27□□□□□ -1.09
PCL8YPL219W AIR2Q12476 344 aaKnown RBP8.27□□□□□ -1.09
PCL8YPL219W SAM3Q08986 587 aa8.25□□□□□ -1.09
PCL8YPL219W TRP5P00931 707 aaKnown RBP8.24□□□□□ -1.09
PCL8YPL219W RTG1P32607 177 aa8.19□□□□□ -1.1
PCL8YPL219W GYP5Q12344 894 aa8.19□□□□□ -1.1
PCL8YPL219W ABP1P15891 592 aaKnown RBP8.18□□□□□ -1.1
PCL8YPL219W SAS10Q12136 610 aaPredicted RBP8.17□□□□□ -1.1
PCL8YPL219W BMT6Q12291 365 aa8.17□□□□□ -1.1
PCL8YPL219W YNL035CP53962 389 aaKnown RBP8.16□□□□□ -1.1
PCL8YPL219W MAK11P20484 414 aaKnown RBP8.15□□□□□ -1.1
PCL8YPL219W MIF2P35201 549 aa8.15□□□□□ -1.1
PCL8YPL219W NCR1Q12200 1170 aa8.15□□□□□ -1.1
PCL8YPL219W RAM2P29703 316 aa8.14□□□□□ -1.11
PCL8YPL219W HTA1P04911 132 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms