RNA–Protein interactions for RNA: YLR048W

RPS0B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS0B, Length 759 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS0B	YLR048W	DRS1	P32892	752 aa	Known RBP	11.94	□□□□□ -0.5
RPS0B	YLR048W	MTC1	P47018	478 aa	Known RBP	11.08	□□□□□ -0.64
RPS0B	YLR048W	BFR2	Q06631	534 aa	Known RBP	10.7	□□□□□ -0.7
RPS0B	YLR048W	TFA1	P36100	482 aa		10.63	□□□□□ -0.71
RPS0B	YLR048W	AVT3	P36062	692 aa		9.99	□□□□□ -0.81
RPS0B	YLR048W	DIP2	Q12220	943 aa	Predicted RBP	9.9	□□□□□ -0.82
RPS0B	YLR048W	RQC2	Q12532	1038 aa	Known RBP	9.9	□□□□□ -0.82
RPS0B	YLR048W	RSE1	Q04693	1361 aa	Known RBP	9.12	□□□□□ -0.95
RPS0B	YLR048W	TAF7	Q05021	590 aa		9.12	□□□□□ -0.95
RPS0B	YLR048W	DMA1	P38823	416 aa		9.07	□□□□□ -0.96
RPS0B	YLR048W	ISW2	Q08773	1120 aa		8.84	□□□□□ -0.99
RPS0B	YLR048W	PTP3	P40048	928 aa		8.75	□□□□□ -1.01
RPS0B	YLR048W	RPL17A	P05740	184 aa	Known RBP	8.72	□□□□□ -1.01
RPS0B	YLR048W	LEO1	P38439	464 aa		8.72	□□□□□ -1.01
RPS0B	YLR048W	RPL17B	P46990	184 aa	Known RBP	8.72	□□□□□ -1.01
RPS0B	YLR048W	RPG1	P38249	964 aa	Known RBP	8.69	□□□□□ -1.02
RPS0B	YLR048W	REB1	P21538	810 aa		8.54	□□□□□ -1.04
RPS0B	YLR048W	RIM101	P33400	625 aa		8.54	□□□□□ -1.04
RPS0B	YLR048W	SSP1	P38871	571 aa		8.52	□□□□□ -1.05
RPS0B	YLR048W	SPT21	P35209	758 aa		8.46	□□□□□ -1.06
RPS0B	YLR048W	PRI1	P10363	409 aa		8.43	□□□□□ -1.06
RPS0B	YLR048W	LEU3	P08638	886 aa		8.37	□□□□□ -1.07
RPS0B	YLR048W	SAS10	Q12136	610 aa	Predicted RBP	8.33	□□□□□ -1.08
RPS0B	YLR048W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	8.32	□□□□□ -1.08	not detected
RPS0B	YLR048W	OXP1	P28273	1286 aa		8.29	□□□□□ -1.08
RPS0B	YLR048W	YAH1	Q12184	172 aa	Known RBP	8.28	□□□□□ -1.08
RPS0B	YLR048W	YLR271W	Q06152	274 aa		8.2	□□□□□ -1.1
RPS0B	YLR048W	AAD16	Q02895	342 aa		8.19	□□□□□ -1.1
RPS0B	YLR048W	YIL055C	P40523	627 aa	Known RBP	8.18	□□□□□ -1.1
RPS0B	YLR048W	FAP1	P53971	965 aa		8.16	□□□□□ -1.1
RPS0B	YLR048W	MGA2	P40578	1113 aa		8.14	□□□□□ -1.11
RPS0B	YLR048W	RPN1	P38764	993 aa	Known RBP	8.09	□□□□□ -1.11
RPS0B	YLR048W	TSR3	Q12094	313 aa	Known RBP	8.07	□□□□□ -1.12
RPS0B	YLR048W	DMA2	P53924	522 aa		8.06	□□□□□ -1.12
RPS0B	YLR048W	RSM7	P47150	247 aa		8.05	□□□□□ -1.12
RPS0B	YLR048W	YKR023W	P36119	530 aa	Known RBP	8.01	□□□□□ -1.13
RPS0B	YLR048W	CST9	Q06032	482 aa		7.99	□□□□□ -1.13
RPS0B	YLR048W	SPB4	P25808	606 aa	Predicted RBP	7.91	□□□□□ -1.14
RPS0B	YLR048W	PSD2	P53037	1138 aa	Known RBP	7.89	□□□□□ -1.15
RPS0B	YLR048W	RLF2	Q12495	606 aa		7.89	□□□□□ -1.15
RPS0B	YLR048W	CKB1	P43639	278 aa		7.88	□□□□□ -1.15
RPS0B	YLR048W	SET1	P38827	1080 aa	Known RBP	7.85	□□□□□ -1.15
RPS0B	YLR048W	AI2	P03876	854 aa		7.84	□□□□□ -1.15
RPS0B	YLR048W	HO	P09932	586 aa		7.84	□□□□□ -1.15
RPS0B	YLR048W	TFC8	Q12308	588 aa		7.84	□□□□□ -1.15
RPS0B	YLR048W	ABP1	P15891	592 aa	Known RBP	7.83	□□□□□ -1.16
RPS0B	YLR048W	RAM2	P29703	316 aa		7.82	□□□□□ -1.16
RPS0B	YLR048W	VPS70	P47161	811 aa		7.82	□□□□□ -1.16
RPS0B	YLR048W	YPR148C	Q06523	435 aa		7.82	□□□□□ -1.16
RPS0B	YLR048W	IFH1	P39520	1085 aa		7.79	□□□□□ -1.16
RPS0B	YLR048W	DCD1	P06773	312 aa		7.75	□□□□□ -1.17
RPS0B	YLR048W	MRPL32	P25348	183 aa		7.75	□□□□□ -1.17
RPS0B	YLR048W	BBC1	P47068	1157 aa		7.74	□□□□□ -1.17
RPS0B	YLR048W	DSF2	P38213	736 aa		7.7	□□□□□ -1.18
RPS0B	YLR048W	KIN1	P13185	1064 aa		7.68	□□□□□ -1.18
RPS0B	YLR048W	YNR021W	P53723	404 aa	Known RBP	7.67	□□□□□ -1.18
RPS0B	YLR048W	PBS2	P08018	668 aa		7.66	□□□□□ -1.18
RPS0B	YLR048W	BCH2	P36122	765 aa		7.65	□□□□□ -1.18
RPS0B	YLR048W	HGH1	P48362	394 aa	Known RBP	7.65	□□□□□ -1.18
RPS0B	YLR048W	MRM1	P25270	412 aa		7.64	□□□□□ -1.19
RPS0B	YLR048W	RCR1	P38212	213 aa		7.64	□□□□□ -1.19
RPS0B	YLR048W	CDC27	P38042	758 aa		7.63	□□□□□ -1.19
RPS0B	YLR048W	MAK11	P20484	414 aa	Known RBP	7.62	□□□□□ -1.19
RPS0B	YLR048W	RTG3	P38165	486 aa		7.6	□□□□□ -1.19
RPS0B	YLR048W	PRY3	P47033	881 aa		7.59	□□□□□ -1.19
RPS0B	YLR048W	AIM7	Q12156	149 aa		7.59	□□□□□ -1.19
RPS0B	YLR048W	EPS1	P40557	701 aa		7.58	□□□□□ -1.2
RPS0B	YLR048W	GLC3	P32775	704 aa		7.56	□□□□□ -1.2
RPS0B	YLR048W	MAM3	Q12296	706 aa		7.56	□□□□□ -1.2
RPS0B	YLR048W	IES2	P40154	320 aa		7.52	□□□□□ -1.21
RPS0B	YLR048W	COQ8	P27697	501 aa		7.51	□□□□□ -1.21
RPS0B	YLR048W	BDF1	P35817	686 aa		7.5	□□□□□ -1.21
RPS0B	YLR048W	REF2	P42073	533 aa	Predicted RBP	7.5	□□□□□ -1.21
RPS0B	YLR048W	NOP53	Q12080	455 aa	Known RBP	7.5	□□□□□ -1.21
RPS0B	YLR048W	DIT2	P21595	489 aa		7.49	□□□□□ -1.21
RPS0B	YLR048W	GUA1	P38625	525 aa	Known RBP	7.49	□□□□□ -1.21
RPS0B	YLR048W	NUP42	P49686	430 aa	Known RBP	7.49	□□□□□ -1.21
RPS0B	YLR048W	MAK21	Q12176	1025 aa	Known RBP	7.48	□□□□□ -1.21
RPS0B	YLR048W	VPS29	P38759	282 aa		7.44	□□□□□ -1.22
RPS0B	YLR048W	ATF2	P53296	535 aa		7.44	□□□□□ -1.22
RPS0B	YLR048W	HPC2	Q01448	625 aa		7.44	□□□□□ -1.22
RPS0B	YLR048W	MIF2	P35201	549 aa		7.4	□□□□□ -1.22
RPS0B	YLR048W	COX6	P00427	148 aa		7.39	□□□□□ -1.23
RPS0B	YLR048W	YML020W	Q03722	664 aa		7.39	□□□□□ -1.23
RPS0B	YLR048W	TFB3	Q03290	321 aa		7.38	□□□□□ -1.23
RPS0B	YLR048W	EDS1	P38073	919 aa		7.37	□□□□□ -1.23
RPS0B	YLR048W	SCY1	P53009	804 aa		7.36	□□□□□ -1.23
RPS0B	YLR048W	SSA1	P10591	642 aa	Known RBP	7.35	□□□□□ -1.23
RPS0B	YLR048W	BRL1	P38770	471 aa		7.34	□□□□□ -1.23
RPS0B	YLR048W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	7.34	□□□□□ -1.23	RIP-Chip
RPS0B	YLR048W	NOP8	Q08287	484 aa	Predicted RBP	7.34	□□□□□ -1.23
RPS0B	YLR048W	SLX8	P40072	274 aa		7.33	□□□□□ -1.24
RPS0B	YLR048W	GEF1	P37020	779 aa		7.32	□□□□□ -1.24
RPS0B	YLR048W	AIM44	Q99299	758 aa		7.32	□□□□□ -1.24
RPS0B	YLR048W	SUB2	Q07478	446 aa	Known RBP	7.31	□□□□□ -1.24
RPS0B	YLR048W	STS1	P38637	319 aa		7.3	□□□□□ -1.24
RPS0B	YLR048W	SSA2	P10592	639 aa	Known RBP	7.28	□□□□□ -1.24
RPS0B	YLR048W	PKC1	P24583	1151 aa		7.28	□□□□□ -1.24
RPS0B	YLR048W	PTC3	P34221	468 aa	Known RBP	7.28	□□□□□ -1.24
RPS0B	YLR048W	DBP1	P24784	617 aa	Known RBP	7.27	□□□□□ -1.25

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms