RNA–Protein interactions for RNA: snR34

snR34, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR34, Length 203 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR34snR34 MTC1P47018 478 aaKnown RBP18.06■□□□□ 0.48
snR34snR34 DRS1P32892 752 aaKnown RBP17.73■□□□□ 0.43
snR34snR34 BFR2Q06631 534 aaKnown RBP15.27■□□□□ 0.04
snR34snR34 FAP1P53971 965 aa15.25■□□□□ 0.03
snR34snR34 DIP2Q12220 943 aaPredicted RBP15.17■□□□□ 0.02
snR34snR34 AVT3P36062 692 aa14.88□□□□□ -0.03
snR34snR34 ISW2Q08773 1120 aa14.8□□□□□ -0.04
snR34snR34 PRI1P10363 409 aa14.76□□□□□ -0.05
snR34snR34 AAD16Q02895 342 aa14.57□□□□□ -0.08
snR34snR34 RPG1P38249 964 aaKnown RBP14.56□□□□□ -0.08
snR34snR34 RSE1Q04693 1361 aaKnown RBP14.47□□□□□ -0.09
snR34snR34 PRY3P47033 881 aa14.29□□□□□ -0.12
snR34snR34 TFA1P36100 482 aa14.2□□□□□ -0.14
snR34snR34 TSR3Q12094 313 aaKnown RBP13.94□□□□□ -0.18
snR34snR34 RPL17AP05740 184 aaKnown RBP13.93□□□□□ -0.18
snR34snR34 RPL17BP46990 184 aaKnown RBP13.93□□□□□ -0.18
snR34snR34 REB1P21538 810 aa13.8□□□□□ -0.2
snR34snR34 HAA1Q12753 694 aaKnown RBP13.54□□□□□ -0.24
snR34snR34 YCK3P39962 524 aa13.53□□□□□ -0.24
snR34snR34 MRPL32P25348 183 aa13.44□□□□□ -0.26
snR34snR34 SPT21P35209 758 aa13.42□□□□□ -0.26
snR34snR34 RIM101P33400 625 aa13.15□□□□□ -0.3
snR34snR34 YKR023WP36119 530 aaKnown RBP13.06□□□□□ -0.32
snR34snR34 CDC27P38042 758 aa12.88□□□□□ -0.35
snR34snR34 TFC8Q12308 588 aa12.82□□□□□ -0.36
snR34snR34 HOP09932 586 aa12.74□□□□□ -0.37
snR34snR34 OXP1P28273 1286 aa12.69□□□□□ -0.38
snR34snR34 YGL015CP33199 130 aa12.69□□□□□ -0.38
snR34snR34 DCD1P06773 312 aa12.63□□□□□ -0.39
snR34snR34 PTP3P40048 928 aa12.53□□□□□ -0.4
snR34snR34 YIL055CP40523 627 aaKnown RBP12.52□□□□□ -0.41
snR34snR34 UBP10P53874 792 aaPredicted RBP12.51□□□□□ -0.41
snR34snR34 YAH1Q12184 172 aaKnown RBP12.47□□□□□ -0.41
snR34snR34 BCH2P36122 765 aa12.4□□□□□ -0.42
snR34snR34 SSP1P38871 571 aa12.4□□□□□ -0.42
snR34snR34 MAP2P38174 421 aaKnown RBP12.39□□□□□ -0.43
snR34snR34 RSM7P47150 247 aa12.34□□□□□ -0.43
snR34snR34 SCY1P53009 804 aa12.29□□□□□ -0.44
snR34snR34 YLR271WQ06152 274 aa12.27□□□□□ -0.45
snR34snR34 ARP8Q12386 881 aaKnown RBP RIP-Chip data12.24□□□□□ -0.45not detected
snR34snR34 EPS1P40557 701 aa12.17□□□□□ -0.46
snR34snR34 AI2P03876 854 aa12.15□□□□□ -0.46
snR34snR34 SLX5P32828 619 aaKnown RBP12.13□□□□□ -0.47
snR34snR34 BBC1P47068 1157 aa12.13□□□□□ -0.47
snR34snR34 BDF1P35817 686 aa12.09□□□□□ -0.47
snR34snR34 PSD2P53037 1138 aaKnown RBP12.02□□□□□ -0.49
snR34snR34 MGA2P40578 1113 aa11.98□□□□□ -0.49
snR34snR34 TIF4632P39936 914 aaKnown RBP11.97□□□□□ -0.49
snR34snR34 TGL3P40308 642 aa11.9□□□□□ -0.5
snR34snR34 CST9Q06032 482 aa11.9□□□□□ -0.5
snR34snR34 RQC2Q12532 1038 aaKnown RBP11.85□□□□□ -0.51
snR34snR34 MRM1P25270 412 aa11.73□□□□□ -0.53
snR34snR34 NSR1P27476 414 aaKnown RBP RIP-Chip data11.69□□□□□ -0.54not detected
snR34snR34 DMA1P38823 416 aa11.64□□□□□ -0.55
snR34snR34 RTG3P38165 486 aa11.59□□□□□ -0.55
snR34snR34 YAP5P40574 245 aa11.55□□□□□ -0.56
snR34snR34 MST1P07236 462 aa11.51□□□□□ -0.57
snR34snR34 RCR1P38212 213 aa11.51□□□□□ -0.57
snR34snR34 YOR238WQ08634 303 aa11.51□□□□□ -0.57
snR34snR34 VPS29P38759 282 aa11.49□□□□□ -0.57
snR34snR34 RAM2P29703 316 aa11.44□□□□□ -0.58
snR34snR34 YMR1P47147 688 aaKnown RBP RIP-Chip data11.44□□□□□ -0.58not detected
snR34snR34 DBP1P24784 617 aaKnown RBP11.35□□□□□ -0.59
snR34snR34 STS1P38637 319 aa11.33□□□□□ -0.6
snR34snR34 MAK11P20484 414 aaKnown RBP11.3□□□□□ -0.6
snR34snR34 UBP9P39967 754 aa11.3□□□□□ -0.6
snR34snR34 YFR006WP43590 535 aa11.27□□□□□ -0.61
snR34snR34 PIB1Q06651 286 aa11.27□□□□□ -0.61
snR34snR34 BUD31P25337 157 aaPredicted RBP11.26□□□□□ -0.61
snR34snR34 GTT3P39996 337 aa11.25□□□□□ -0.61
snR34snR34 VMA1P17255 1071 aaKnown RBP11.19□□□□□ -0.62
snR34snR34 SET1P38827 1080 aaKnown RBP11.15□□□□□ -0.62
snR34snR34 SAM3Q08986 587 aa11.14□□□□□ -0.63
snR34snR34 COQ8P27697 501 aa11.12□□□□□ -0.63
snR34snR34 MIF2P35201 549 aa11.11□□□□□ -0.63
snR34snR34 YBL029C-AQ3E756 94 aa11.11□□□□□ -0.63
snR34snR34 VNX1P42839 908 aa11.09□□□□□ -0.63
snR34snR34 NOP53Q12080 455 aaKnown RBP11.09□□□□□ -0.63
snR34snR34 WSC3Q12215 556 aa11.07□□□□□ -0.64
snR34snR34 MSB4Q12317 492 aa11.07□□□□□ -0.64
snR34snR34 EDS1P38073 919 aa11.06□□□□□ -0.64
snR34snR34 YOL036WQ08206 761 aa11.05□□□□□ -0.64
snR34snR34 SAS10Q12136 610 aaPredicted RBP11.04□□□□□ -0.64
snR34snR34 PTC3P34221 468 aaKnown RBP11.01□□□□□ -0.65
snR34snR34 ABP1P15891 592 aaKnown RBP10.99□□□□□ -0.65
snR34snR34 TIF11P38912 153 aaKnown RBP10.98□□□□□ -0.65
snR34snR34 SET4P42948 560 aa10.98□□□□□ -0.65
snR34snR34 GYP5Q12344 894 aa10.98□□□□□ -0.65
snR34snR34 IFH1P39520 1085 aa10.97□□□□□ -0.65
snR34snR34 SPP1Q03012 353 aa10.97□□□□□ -0.65
snR34snR34 EAP1P36041 632 aaKnown RBP10.96□□□□□ -0.65
snR34snR34 YPR148CQ06523 435 aa10.95□□□□□ -0.66
snR34snR34 GRE2Q12068 342 aaKnown RBP10.95□□□□□ -0.66
snR34snR34 GUT1P32190 709 aa10.9□□□□□ -0.66
snR34snR34 VPS70P47161 811 aa10.9□□□□□ -0.66
snR34snR34 ATH1P48016 1211 aa10.9□□□□□ -0.66
snR34snR34 ULI1P43604 169 aa10.89□□□□□ -0.67
snR34snR34 HTA1P04911 132 aaKnown RBP10.86□□□□□ -0.67
snR34snR34 HTA2P04912 132 aa10.86□□□□□ -0.67
snR34snR34 IOC2Q12072 812 aa10.85□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms