RNA–Protein interactions for RNA: YKR077W

MSA2, Transcript of Putative transcriptional activator, yeastyeast

Gene MSA2, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSA2YKR077W MTC1P47018 478 aaKnown RBP19.09■□□□□ 0.65
MSA2YKR077W DRS1P32892 752 aaKnown RBP17.85■□□□□ 0.45
MSA2YKR077W FAP1P53971 965 aa17.2■□□□□ 0.34
MSA2YKR077W PRY3P47033 881 aa16.15■□□□□ 0.18
MSA2YKR077W PRI1P10363 409 aa16.06■□□□□ 0.16
MSA2YKR077W AAD16Q02895 342 aa15.96■□□□□ 0.15
MSA2YKR077W ISW2Q08773 1120 aa15.82■□□□□ 0.12
MSA2YKR077W RPG1P38249 964 aaKnown RBP15.65■□□□□ 0.1
MSA2YKR077W DIP2Q12220 943 aaPredicted RBP15.61■□□□□ 0.09
MSA2YKR077W YCK3P39962 524 aa15.2■□□□□ 0.02
MSA2YKR077W TSR3Q12094 313 aaKnown RBP15.2■□□□□ 0.02
MSA2YKR077W HAA1Q12753 694 aaKnown RBP15.12■□□□□ 0.01
MSA2YKR077W RSE1Q04693 1361 aaKnown RBP15.11■□□□□ 0.01
MSA2YKR077W AVT3P36062 692 aa15.04■□□□□ -0
MSA2YKR077W BFR2Q06631 534 aaKnown RBP14.85□□□□□ -0.03
MSA2YKR077W RPL17AP05740 184 aaKnown RBP14.65□□□□□ -0.06
MSA2YKR077W RPL17BP46990 184 aaKnown RBP14.65□□□□□ -0.06
MSA2YKR077W MRPL32P25348 183 aa14.6□□□□□ -0.07
MSA2YKR077W REB1P21538 810 aa14.59□□□□□ -0.07
MSA2YKR077W SPT21P35209 758 aa13.99□□□□□ -0.17
MSA2YKR077W YGL015CP33199 130 aa13.97□□□□□ -0.17
MSA2YKR077W CDC27P38042 758 aa13.88□□□□□ -0.19
MSA2YKR077W TFA1P36100 482 aa13.85□□□□□ -0.19
MSA2YKR077W YKR023WP36119 530 aaKnown RBP13.82□□□□□ -0.2
MSA2YKR077W HOP09932 586 aa13.56□□□□□ -0.24
MSA2YKR077W TFC8Q12308 588 aa13.55□□□□□ -0.24
MSA2YKR077W DCD1P06773 312 aa13.52□□□□□ -0.25
MSA2YKR077W RIM101P33400 625 aa13.48□□□□□ -0.25
MSA2YKR077W UBP10P53874 792 aaPredicted RBP13.48□□□□□ -0.25
MSA2YKR077W MAP2P38174 421 aaKnown RBP13.45□□□□□ -0.26
MSA2YKR077W SCY1P53009 804 aa13.19□□□□□ -0.3
MSA2YKR077W BCH2P36122 765 aa13.1□□□□□ -0.31
MSA2YKR077W OXP1P28273 1286 aa13.03□□□□□ -0.32
MSA2YKR077W SLX5P32828 619 aaKnown RBP13.02□□□□□ -0.33
MSA2YKR077W TIF4632P39936 914 aaKnown RBP12.93□□□□□ -0.34
MSA2YKR077W PTP3P40048 928 aa12.88□□□□□ -0.35
MSA2YKR077W YIL055CP40523 627 aaKnown RBP12.87□□□□□ -0.35
MSA2YKR077W TGL3P40308 642 aa12.84□□□□□ -0.35
MSA2YKR077W BUD31P25337 157 aaPredicted RBP12.81□□□□□ -0.36
MSA2YKR077W EPS1P40557 701 aa12.8□□□□□ -0.36
MSA2YKR077W BDF1P35817 686 aa12.73□□□□□ -0.37
MSA2YKR077W YAH1Q12184 172 aaKnown RBP12.71□□□□□ -0.37
MSA2YKR077W RSM7P47150 247 aa12.66□□□□□ -0.38
MSA2YKR077W BBC1P47068 1157 aa12.58□□□□□ -0.4
MSA2YKR077W AI2P03876 854 aa12.56□□□□□ -0.4
MSA2YKR077W UBP9P39967 754 aa12.47□□□□□ -0.41
MSA2YKR077W YLR271WQ06152 274 aa12.45□□□□□ -0.42
MSA2YKR077W SSP1P38871 571 aa12.31□□□□□ -0.44
MSA2YKR077W NSR1P27476 414 aaKnown RBP RIP-Chip data12.3□□□□□ -0.44not detected
MSA2YKR077W YOR238WQ08634 303 aa12.29□□□□□ -0.44
MSA2YKR077W MST1P07236 462 aa12.28□□□□□ -0.44
MSA2YKR077W PSD2P53037 1138 aaKnown RBP12.27□□□□□ -0.45
MSA2YKR077W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.24□□□□□ -0.45not detected
MSA2YKR077W SIS1P25294 352 aaKnown RBP12.22□□□□□ -0.45
MSA2YKR077W YAP5P40574 245 aa12.22□□□□□ -0.45
MSA2YKR077W YBL029C-AQ3E756 94 aa12.15□□□□□ -0.46
MSA2YKR077W MRM1P25270 412 aa12.12□□□□□ -0.47
MSA2YKR077W CST9Q06032 482 aa12.03□□□□□ -0.48
MSA2YKR077W MGA2P40578 1113 aa12□□□□□ -0.49
MSA2YKR077W VNX1P42839 908 aa12□□□□□ -0.49
MSA2YKR077W GTT3P39996 337 aa11.99□□□□□ -0.49
MSA2YKR077W WSC3Q12215 556 aa11.99□□□□□ -0.49
MSA2YKR077W PIB1Q06651 286 aa11.96□□□□□ -0.49
MSA2YKR077W SPP1Q03012 353 aa11.9□□□□□ -0.5
MSA2YKR077W RTG3P38165 486 aa11.85□□□□□ -0.51
MSA2YKR077W VPS29P38759 282 aa11.81□□□□□ -0.52
MSA2YKR077W YMR1P47147 688 aaKnown RBP RIP-Chip data11.81□□□□□ -0.52not detected
MSA2YKR077W TIF11P38912 153 aaKnown RBP11.8□□□□□ -0.52
MSA2YKR077W DBP1P24784 617 aaKnown RBP11.76□□□□□ -0.53
MSA2YKR077W YFR006WP43590 535 aa11.75□□□□□ -0.53
MSA2YKR077W RCR1P38212 213 aa11.74□□□□□ -0.53
MSA2YKR077W STS1P38637 319 aa11.71□□□□□ -0.53
MSA2YKR077W ULI1P43604 169 aa11.67□□□□□ -0.54
MSA2YKR077W MSB4Q12317 492 aa11.66□□□□□ -0.54
MSA2YKR077W YOL036WQ08206 761 aa11.65□□□□□ -0.54
MSA2YKR077W FKH1P40466 484 aa11.64□□□□□ -0.55
MSA2YKR077W RQC2Q12532 1038 aaKnown RBP11.64□□□□□ -0.55
MSA2YKR077W VMA1P17255 1071 aaKnown RBP11.63□□□□□ -0.55
MSA2YKR077W LDB19Q12502 818 aa11.63□□□□□ -0.55
MSA2YKR077W SET4P42948 560 aa11.62□□□□□ -0.55
MSA2YKR077W IOC2Q12072 812 aa11.6□□□□□ -0.55
MSA2YKR077W AIR2Q12476 344 aaKnown RBP11.6□□□□□ -0.55
MSA2YKR077W EAP1P36041 632 aaKnown RBP11.58□□□□□ -0.56
MSA2YKR077W SAM3Q08986 587 aa11.54□□□□□ -0.56
MSA2YKR077W YJL171CP46992 396 aa11.51□□□□□ -0.57
MSA2YKR077W TRP5P00931 707 aaKnown RBP11.5□□□□□ -0.57
MSA2YKR077W RTG1P32607 177 aa11.42□□□□□ -0.58
MSA2YKR077W GYP5Q12344 894 aa11.4□□□□□ -0.58
MSA2YKR077W RAM2P29703 316 aa11.39□□□□□ -0.59
MSA2YKR077W ABP1P15891 592 aaKnown RBP11.37□□□□□ -0.59
MSA2YKR077W YNL035CP53962 389 aaKnown RBP11.37□□□□□ -0.59
MSA2YKR077W BMT6Q12291 365 aa11.37□□□□□ -0.59
MSA2YKR077W MAK11P20484 414 aaKnown RBP11.36□□□□□ -0.59
MSA2YKR077W DMA1P38823 416 aa11.35□□□□□ -0.59
MSA2YKR077W NCR1Q12200 1170 aa11.33□□□□□ -0.6
MSA2YKR077W SEC61P32915 480 aa11.32□□□□□ -0.6
MSA2YKR077W DCW1P36091 449 aa11.32□□□□□ -0.6
MSA2YKR077W HTA1P04911 132 aaKnown RBP11.31□□□□□ -0.6
MSA2YKR077W HTA2P04912 132 aa11.31□□□□□ -0.6
MSA2YKR077W MIF2P35201 549 aa11.31□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms