Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPS4Y1P22090 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPS4Y1P22090 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPS4Y1P22090 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RPS4Y1P22090 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RPS4Y1P22090 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPS4Y1P22090 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPS4Y1P22090 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPS4Y1P22090 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPS4Y1P22090 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RPS4Y1P22090 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPS4Y1P22090 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
RPS4Y1P22090 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPS4Y1P22090 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPS4Y1P22090 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPS4Y1P22090 GUSBP5-201ENST00000418136 578 ntBASIC20.43■□□□□ 0.86
RPS4Y1P22090 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.43■□□□□ 0.86
RPS4Y1P22090 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.43■□□□□ 0.86
RPS4Y1P22090 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPS4Y1P22090 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.43■□□□□ 0.86
RPS4Y1P22090 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPS4Y1P22090 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPS4Y1P22090 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPS4Y1P22090 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPS4Y1P22090 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPS4Y1P22090 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPS4Y1P22090 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.43■□□□□ 0.86
RPS4Y1P22090 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPS4Y1P22090 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPS4Y1P22090 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.42■□□□□ 0.86
RPS4Y1P22090 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RPS4Y1P22090 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPS4Y1P22090 AC009086.3-201ENST00000623486 1008 ntBASIC20.42■□□□□ 0.86
RPS4Y1P22090 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPS4Y1P22090 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPS4Y1P22090 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.42■□□□□ 0.86
RPS4Y1P22090 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPS4Y1P22090 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPS4Y1P22090 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RPS4Y1P22090 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RPS4Y1P22090 ECEL1P1-201ENST00000373592 1742 ntBASIC20.41■□□□□ 0.86
RPS4Y1P22090 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPS4Y1P22090 KRT16P3-201ENST00000439127 1283 ntBASIC20.41■□□□□ 0.86
RPS4Y1P22090 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPS4Y1P22090 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.41■□□□□ 0.86
RPS4Y1P22090 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPS4Y1P22090 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.41■□□□□ 0.86
RPS4Y1P22090 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.41■□□□□ 0.86
RPS4Y1P22090 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RPS4Y1P22090 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RPS4Y1P22090 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPS4Y1P22090 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.4■□□□□ 0.86
RPS4Y1P22090 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.4■□□□□ 0.86
RPS4Y1P22090 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.4■□□□□ 0.86
RPS4Y1P22090 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPS4Y1P22090 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.4■□□□□ 0.86
RPS4Y1P22090 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RPS4Y1P22090 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RPS4Y1P22090 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
RPS4Y1P22090 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RPS4Y1P22090 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RPS4Y1P22090 AC087742.1-201ENST00000575880 1738 ntBASIC20.39■□□□□ 0.86
RPS4Y1P22090 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
RPS4Y1P22090 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.39■□□□□ 0.85
RPS4Y1P22090 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.39■□□□□ 0.85
RPS4Y1P22090 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.39■□□□□ 0.85
RPS4Y1P22090 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPS4Y1P22090 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPS4Y1P22090 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RPS4Y1P22090 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RPS4Y1P22090 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.38■□□□□ 0.85
RPS4Y1P22090 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RPS4Y1P22090 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPS4Y1P22090 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPS4Y1P22090 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
RPS4Y1P22090 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.37■□□□□ 0.85
RPS4Y1P22090 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPS4Y1P22090 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.37■□□□□ 0.85
RPS4Y1P22090 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.37■□□□□ 0.85
RPS4Y1P22090 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.37■□□□□ 0.85
RPS4Y1P22090 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.37■□□□□ 0.85
RPS4Y1P22090 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPS4Y1P22090 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.37■□□□□ 0.85
RPS4Y1P22090 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.37■□□□□ 0.85
RPS4Y1P22090 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.37■□□□□ 0.85
RPS4Y1P22090 AL117332.1-201ENST00000622628 974 ntBASIC20.37■□□□□ 0.85
RPS4Y1P22090 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.37■□□□□ 0.85
RPS4Y1P22090 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RPS4Y1P22090 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPS4Y1P22090 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPS4Y1P22090 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPS4Y1P22090 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.37■□□□□ 0.85
RPS4Y1P22090 AC242852.2-201ENST00000615738 1807 ntBASIC20.37■□□□□ 0.85
RPS4Y1P22090 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPS4Y1P22090 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPS4Y1P22090 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.36■□□□□ 0.85
RPS4Y1P22090 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPS4Y1P22090 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RPS4Y1P22090 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RPS4Y1P22090 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 281.7 ms